RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SLC39A6	Q13433	755 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	PROSER3	Q2NL68	480 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	CCDC183	Q5T5S1	534 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	GORAB	Q5T7V8	394 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	LARP1B	Q659C4	914 aa	Known RBP	7.51	□□□□□ -1.21
FN1-223	ENST00000490833	PRPF40B	Q6NWY9	871 aa	Known RBP	7.51	□□□□□ -1.21
FN1-223	ENST00000490833	CAVIN1	Q6NZI2	390 aa	Known RBP	7.51	□□□□□ -1.21
FN1-223	ENST00000490833	UBE3B	Q7Z3V4	1068 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	LRP10	Q7Z4F1	713 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	UNC5CL	Q8IV45	518 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.51	□□□□□ -1.21
FN1-223	ENST00000490833	WNT2B	Q93097	391 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	ZDHHC16	Q969W1	377 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	NEK1	Q96PY6	1258 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	CCDC39	Q9UFE4	941 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	RBM8A	Q9Y5S9	174 aa	Known RBP	7.51	□□□□□ -1.21
FN1-223	ENST00000490833	PKD1L3	Q7Z443	1732 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	WDR19	Q8NEZ3	1342 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	CDHR2	Q9BYE9	1310 aa		7.51	□□□□□ -1.21
FN1-223	ENST00000490833	PALLD	Q8WX93	1383 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	GOLGA6L6	A8MZA4	724 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	ESPN	B1AK53	854 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	EXOC5	O00471	708 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	SLC27A2	O14975	620 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	TAF5L	O75529	589 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	F13A1	P00488	732 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	RPS6KB1	P23443	525 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	RFX5	P48382	616 aa	Predicted RBP	7.5	□□□□□ -1.21
FN1-223	ENST00000490833	IFIT5	Q13325	482 aa	Known RBP	7.5	□□□□□ -1.21
FN1-223	ENST00000490833	TAF7L	Q5H9L4	462 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	LMBR1L	Q6UX01	489 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	ZGPAT	Q8N5A5	531 aa	Known RBP	7.5	□□□□□ -1.21
FN1-223	ENST00000490833	KAZALD1	Q96I82	304 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	ISCA1	Q9BUE6	129 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	UPF3B	Q9BZI7	483 aa	Known RBP	7.5	□□□□□ -1.21
FN1-223	ENST00000490833	NBPF3	Q9H094	633 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	BOLA2	Q9H3K6	86 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	TSPY26P	Q9H489	355 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	COL18A1	P39060	1754 aa		7.5	□□□□□ -1.21
FN1-223	ENST00000490833	CARMIL3	Q8ND23	1372 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	JCAD	Q9P266	1359 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	MED23	Q9ULK4	1368 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	MEGF6	O75095	1541 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	CTAGE5	O15320	804 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	RNF113A	O15541	343 aa	Known RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ANXA1	P04083	346 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	UQCRFS1P1	P0C7P4	283 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	SYT1	P21579	422 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	CASP7	P55210	303 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	TFCP2	Q12800	502 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	NMI	Q13287	307 aa	Predicted RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	CPLX2	Q6PUV4	134 aa	Known RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	THSD4	Q6ZMP0	1018 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	DHX32	Q7L7V1	743 aa	Known RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ZSCAN30	Q86W11	494 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ZNF274	Q96GC6	653 aa	Predicted RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	MTA3	Q9BTC8	594 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ZBED2	Q9BTP6	218 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	SLC4A5	Q9BY07	1137 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ADAM33	Q9BZ11	813 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	PAG1	Q9NWQ8	432 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	BRPF3	Q9ULD4	1205 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	PALD1	Q9ULE6	856 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	ZDHHC9	Q9Y397	364 aa		7.49	□□□□□ -1.21
FN1-223	ENST00000490833	COL5A2	P05997	1499 aa	Predicted RBP	7.49	□□□□□ -1.21
FN1-223	ENST00000490833	AK9	Q5TCS8	1911 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	RPAP1	Q9BWH6	1393 aa	Predicted RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	TUBGCP6	Q96RT7	1819 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	SPEF2	Q9C093	1822 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	ANKRD18B	A2A2Z9	1011 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833		H3BQV1	296 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	CSF1R	P07333	972 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	IFIT1	P09914	478 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	CCDC192	P0DO97	292 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	GJB2	P29033	226 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	IL6ST	P40189	918 aa	Predicted RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	FOXO4	P98177	505 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	TRDN	Q13061	729 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	CHRNA2	Q15822	529 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	IMMT	Q16891	758 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	PARP10	Q53GL7	1025 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	TSHZ3	Q63HK5	1081 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	TNS2	Q63HR2	1409 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	NAA16	Q6N069	864 aa	Predicted RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	SMARCC1	Q92922	1105 aa	Predicted RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	ZNF396	Q96N95	335 aa	Predicted RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	NEUROD6	Q96NK8	337 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	NOL10	Q9BSC4	688 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	SIL1	Q9H173	461 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	DDX19A	Q9NUU7	478 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	TBC1D2B	Q9UPU7	963 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	PA2G4	Q9UQ80	394 aa	Known RBP	7.48	□□□□□ -1.21
FN1-223	ENST00000490833	CHMP3	Q9Y3E7	222 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	CRYBG1	Q9Y4K1	1723 aa		7.48	□□□□□ -1.21
FN1-223	ENST00000490833	LCE2B	O14633	110 aa		7.47	□□□□□ -1.21
FN1-223	ENST00000490833	GTPBP6	O43824	516 aa	Predicted RBP	7.47	□□□□□ -1.21
FN1-223	ENST00000490833	CDKL5	O76039	1030 aa		7.47	□□□□□ -1.21
FN1-223	ENST00000490833	MAP4K4	O95819	1239 aa	Predicted RBP	7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms