RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GLI2P10070 1586 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 CT47A1Q5JQC4 288 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 PDILTQ8N807 584 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
ARHGEF39-205ENST00000490638 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.26
ARHGEF39-205ENST00000490638 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 MAST3O60307 1309 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 TRAF1Q13077 416 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 PRC1O43663 620 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 RTN1Q16799 776 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 CHST3Q7LGC8 479 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 SRP68Q9UHB9 627 aaKnown RBP16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
ARHGEF39-205ENST00000490638 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 CHMLP26374 656 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 MFSD14BQ5SR56 506 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 APPBP2Q92624 585 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 KDRP35968 1356 aa16.69■□□□□ 0.26
ARHGEF39-205ENST00000490638 H7C1D1 291 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 DLGAP5Q15398 846 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 TMEM266Q2M3C6 531 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 SCLT1Q96NL6 688 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 GREM2Q9H772 168 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 SPATA31A6Q5VVP1 1343 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 MMP10P09238 476 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 ZMYM4Q5VZL5 1548 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 KCNQ2O43526 872 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 ZAP70P43403 619 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 ECM2O94769 699 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 GYG1P46976 350 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 TFIP11Q9UBB9 837 aaKnown RBP16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF39-205ENST00000490638 SMC2O95347 1197 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 GJB2P29033 226 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 Q6ZUG5 572 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 ATG3Q9NT62 314 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
ARHGEF39-205ENST00000490638 RPS6KA4O75676 772 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 ANAPC15P60006 121 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 RAB3GAP1Q15042 981 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 TTF2Q9UNY4 1162 aaKnown RBP16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 CAMSAP1Q5T5Y3 1602 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 TCP10Q12799 353 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 PLS1Q14651 629 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 TBC1D32Q96NH3 1257 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 GPAA1O43292 621 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 PRKG1Q13976 671 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 TANGO6Q9C0B7 1094 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 DACH1Q9UI36 760 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 TTLL5Q6EMB2 1281 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 CCDC129Q6ZRS4 1044 aa16.66■□□□□ 0.26
ARHGEF39-205ENST00000490638 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 CREB3L3Q68CJ9 461 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 HELLSQ9NRZ9 838 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 ABCC4O15439 1325 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 E9PCH4 1651 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 PRDM1O75626 825 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 ODF2Q5BJF6 829 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 RAD50Q92878 1312 aa16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
ARHGEF39-205ENST00000490638 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms