RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
PDLIM1-203ENST00000490391 ZNRF3Q9ULT6 936 aa9.75□□□□□ -0.85
PDLIM1-203ENST00000490391 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
PDLIM1-203ENST00000490391 PIP4K2AP48426 406 aaPredicted RBP9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 AOC3Q16853 763 aa9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 MTHFSDQ2M296 383 aaKnown RBP9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 NOM1Q5C9Z4 860 aaKnown RBP9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 RASAL3Q86YV0 1011 aa9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 C2orf69Q8N8R5 385 aa9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 SLC17A8Q8NDX2 589 aa9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
PDLIM1-203ENST00000490391 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 ADM5C9JUS6 153 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 EGFRP00533 1210 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 MFSD10Q14728 455 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 KRT26Q7Z3Y9 468 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 VPS33BQ9H267 617 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 CNOT7Q9UIV1 285 aaKnown RBP9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 HDAC9Q9UKV0 1011 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 ZNF652Q9Y2D9 606 aa9.73□□□□□ -0.85
PDLIM1-203ENST00000490391 RAD17O75943 681 aa9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 TBC1D8O95759 1140 aa9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 NPM2Q86SE8 214 aaKnown RBP9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 RTFDC1Q9BY42 306 aaPredicted RBP9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 TTC28Q96AY4 2481 aa9.72□□□□□ -0.85
PDLIM1-203ENST00000490391 YDJCA8MPS7 323 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 GPR25O00155 361 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 KCNQ3O43525 872 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 HLFQ16534 295 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 PACS2Q86VP3 889 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 IL17REQ8NFR9 667 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 USP16Q9Y5T5 823 aa9.71□□□□□ -0.86
PDLIM1-203ENST00000490391 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 KIAA2012Q0VF49 1180 aa9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
PDLIM1-203ENST00000490391 HMOX1P09601 288 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 TNIP1Q15025 636 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 INTS3Q68E01 1043 aaKnown RBP9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 DPF2Q92785 391 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 DUOX1Q9NRD9 1551 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
PDLIM1-203ENST00000490391 NUP98P52948 1817 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 IBTKQ9P2D0 1353 aaPredicted RBP9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 H7C1D1 291 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 EN2P19622 333 aaPredicted RBP9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 TM4SF4P48230 202 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 TEFQ10587 303 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
PDLIM1-203ENST00000490391 UBN2Q6ZU65 1347 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 H0YGN5 161 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 FKTNO75072 461 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 DGAT1O75907 488 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 GGCXP38435 758 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 SUPT20HQ8NEM7 779 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 CDCA5Q96FF9 252 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 RBM17Q96I25 401 aaKnown RBP9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
PDLIM1-203ENST00000490391 ASTN2O75129 1339 aaPredicted RBP9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 OTOP1Q7RTM1 612 aa9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 ARMC5Q96C12 935 aa9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 DCPSQ96C86 337 aaKnown RBP9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 MUC3AQ02505 3323 aa9.66□□□□□ -0.86
PDLIM1-203ENST00000490391 LAMA2P24043 3122 aaKnown RBP9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 ABCC4O15439 1325 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 PSMD14O00487 310 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 NTSR2O95665 410 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 FKBP1BP68106 108 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 DPP8Q6V1X1 898 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 GGA3Q9NZ52 723 aa9.65□□□□□ -0.86
PDLIM1-203ENST00000490391 GNAT3A8MTJ3 354 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 MORC1Q86VD1 984 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 SULF1Q8IWU6 871 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 MPNDQ8N594 471 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 PRO3102Q9H379 93 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 TRIM17Q9Y577 477 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 SCN9AQ15858 1988 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms