RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 CSRNP1Q96S65 589 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 NOP53Q9NZM5 478 aaKnown RBP9.57□□□□□ -0.88
CCDC39-206ENST00000489868 SMNDC1O75940 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC39-206ENST00000489868 EDN3P14138 238 aa9.56□□□□□ -0.88
CCDC39-206ENST00000489868 WFDC8Q8IUA0 241 aa9.56□□□□□ -0.88
CCDC39-206ENST00000489868 SETDB2Q96T68 719 aa9.56□□□□□ -0.88
CCDC39-206ENST00000489868 NPHS2Q9NP85 383 aa9.56□□□□□ -0.88
CCDC39-206ENST00000489868 A0A1W2PP55 124 aa9.55□□□□□ -0.88
CCDC39-206ENST00000489868 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-206ENST00000489868 DEAF1O75398 565 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-206ENST00000489868 FMR1Q06787 632 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC39-206ENST00000489868 TMEM151AQ8N4L1 468 aa9.55□□□□□ -0.88
CCDC39-206ENST00000489868 TMEM102Q8N9M5 508 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-206ENST00000489868 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
CCDC39-206ENST00000489868 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-206ENST00000489868 EPHA1P21709 976 aa9.54□□□□□ -0.88
CCDC39-206ENST00000489868 DNAJC14Q6Y2X3 702 aaPredicted RBP9.54□□□□□ -0.88
CCDC39-206ENST00000489868 CCDC74AQ96AQ1 378 aa9.54□□□□□ -0.88
CCDC39-206ENST00000489868 DNAJC25Q9H1X3 360 aa9.54□□□□□ -0.88
CCDC39-206ENST00000489868 METTL12A8MUP2 240 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 NEFLP07196 543 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 GRIK4Q16099 956 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
CCDC39-206ENST00000489868 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 PI16Q6UXB8 463 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-206ENST00000489868 FMR1NBQ8N0W7 255 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-206ENST00000489868 EPS8L3Q8TE67 593 aaKnown RBP9.53□□□□□ -0.88
CCDC39-206ENST00000489868 TCF12Q99081 682 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-206ENST00000489868 ADAM19Q9H013 955 aa9.53□□□□□ -0.88
CCDC39-206ENST00000489868 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
CCDC39-206ENST00000489868 TM4SF5O14894 197 aa9.52□□□□□ -0.89
CCDC39-206ENST00000489868 P4HBP07237 508 aaKnown RBP9.52□□□□□ -0.89
CCDC39-206ENST00000489868 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.89
CCDC39-206ENST00000489868 TRIM28Q13263 835 aaKnown RBP9.52□□□□□ -0.89
CCDC39-206ENST00000489868 CDC27P30260 824 aa9.51□□□□□ -0.89
CCDC39-206ENST00000489868 CDC25BP30305 580 aa9.51□□□□□ -0.89
CCDC39-206ENST00000489868 SETDB1Q15047 1291 aa9.51□□□□□ -0.89
CCDC39-206ENST00000489868 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
CCDC39-206ENST00000489868 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
CCDC39-206ENST00000489868 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 LINC01387J3KSC0 135 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 PTPRAP18433 802 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 CHRNA4P43681 627 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 SHISA2Q6UWI4 295 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
CCDC39-206ENST00000489868 FBXO11Q86XK2 927 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 CCNJLQ8IV13 435 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
CCDC39-206ENST00000489868 SELPP16109 830 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 MAPK8P45983 427 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 GRIA4P48058 902 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 RAC1P63000 192 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 VN1R5Q7Z5H4 357 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 CD163Q86VB7 1156 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 DTWD1Q8N5C7 304 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 GALNT11Q8NCW6 608 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 LIN7BQ9HAP6 207 aa9.49□□□□□ -0.89
CCDC39-206ENST00000489868 ELNP15502 786 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
CCDC39-206ENST00000489868 SPRED3Q2MJR0 410 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 HGSNATQ68CP4 663 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 CACTIN-AS1Q8N1I8 211 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 GLIS3Q8NEA6 775 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
CCDC39-206ENST00000489868 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
CCDC39-206ENST00000489868 GRM2Q14416 872 aa9.47□□□□□ -0.89
CCDC39-206ENST00000489868 NPAS4Q8IUM7 802 aa9.47□□□□□ -0.89
CCDC39-206ENST00000489868 BSNDQ8WZ55 320 aa9.47□□□□□ -0.89
CCDC39-206ENST00000489868 EHD4Q9H223 541 aa9.47□□□□□ -0.89
CCDC39-206ENST00000489868 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
CCDC39-206ENST00000489868 DLL1O00548 723 aa9.46□□□□□ -0.9
CCDC39-206ENST00000489868 CCDC27Q2M243 656 aa9.46□□□□□ -0.9
CCDC39-206ENST00000489868 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC39-206ENST00000489868 ABCB6Q9NP58 842 aa9.46□□□□□ -0.9
CCDC39-206ENST00000489868 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
CCDC39-206ENST00000489868 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
CCDC39-206ENST00000489868 KCNK4Q9NYG8 393 aa9.45□□□□□ -0.9
CCDC39-206ENST00000489868 A0A096LPE4 126 aa9.44□□□□□ -0.9
CCDC39-206ENST00000489868 A0A1W2PPZ6 126 aa9.44□□□□□ -0.9
CCDC39-206ENST00000489868 H3BRJ5 948 aa9.44□□□□□ -0.9
CCDC39-206ENST00000489868 FSCN2O14926 492 aa9.44□□□□□ -0.9
CCDC39-206ENST00000489868 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
CCDC39-206ENST00000489868 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
CCDC39-206ENST00000489868 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
CCDC39-206ENST00000489868 ADAM11O75078 769 aa9.43□□□□□ -0.9
CCDC39-206ENST00000489868 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
CCDC39-206ENST00000489868 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
CCDC39-206ENST00000489868 PROCP04070 461 aa9.42□□□□□ -0.9
CCDC39-206ENST00000489868 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
CCDC39-206ENST00000489868 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms