RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 GDF15Q99988 308 aa9.78□□□□□ -0.84
COL9A1-209ENST00000489861 POLR3GLQ9BT43 218 aa9.78□□□□□ -0.84
COL9A1-209ENST00000489861 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
COL9A1-209ENST00000489861 WNT10BO00744 389 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 MYL6BP14649 208 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 BMP8BP34820 402 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 GJA8P48165 433 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 LRIT3Q3SXY7 679 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 TBC1D16Q8TBP0 767 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
COL9A1-209ENST00000489861 PHACTR3Q96KR7 559 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 GUCD1Q96NT3 240 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 OTOFQ9HC10 1997 aa9.77□□□□□ -0.85
COL9A1-209ENST00000489861 BDP1A6H8Y1 2624 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 SSC5DA1L4H1 1573 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 TESPA1A2RU30 521 aaPredicted RBP9.76□□□□□ -0.85
COL9A1-209ENST00000489861 EVI5O60447 810 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
COL9A1-209ENST00000489861 MAP3K11Q16584 847 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 EYA3Q99504 573 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 RPTORQ8N122 1335 aa9.76□□□□□ -0.85
COL9A1-209ENST00000489861 FARP2O94887 1054 aaPredicted RBP9.75□□□□□ -0.85
COL9A1-209ENST00000489861 GJB1P08034 283 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 ARHGEF6Q15052 776 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 MCM10Q7L590 875 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 FAM122AQ96E09 287 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 ZC3H12CQ9C0D7 883 aaKnown RBP9.75□□□□□ -0.85
COL9A1-209ENST00000489861 MIS18AQ9NYP9 233 aa9.75□□□□□ -0.85
COL9A1-209ENST00000489861 SASH1O94885 1247 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 CCL5P13501 91 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 DCTN1Q14203 1278 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
COL9A1-209ENST00000489861 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 MXD3Q9BW11 206 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
COL9A1-209ENST00000489861 TAF1CQ15572 869 aaPredicted RBP9.73□□□□□ -0.85
COL9A1-209ENST00000489861 NLRP10Q86W26 655 aa9.73□□□□□ -0.85
COL9A1-209ENST00000489861 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
COL9A1-209ENST00000489861 ECM29Q5VYK3 1845 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 COL3A1P02461 1466 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-209ENST00000489861 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 G3V3G9 751 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 POTEB2H3BUK9 544 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-209ENST00000489861 CTGFP29279 349 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 LACTBP83111 547 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-209ENST00000489861 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 LRP10Q7Z4F1 713 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 U2AF1L4Q8WU68 220 aaKnown RBP9.72□□□□□ -0.85
COL9A1-209ENST00000489861 BRI3BPQ8WY22 251 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 THUMPD2Q9BTF0 503 aaKnown RBP9.72□□□□□ -0.85
COL9A1-209ENST00000489861 RNF208Q9H0X6 261 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 CACNA1AO00555 2505 aa9.72□□□□□ -0.85
COL9A1-209ENST00000489861 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
COL9A1-209ENST00000489861 UFL1O94874 794 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 KCNA4P22459 653 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 APOBEC3FQ8IUX4 373 aaKnown RBP9.71□□□□□ -0.86
COL9A1-209ENST00000489861 TDHQ8IZJ6 230 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 FAM43AQ8N2R8 423 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 PODXL2Q9NZ53 605 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.86
COL9A1-209ENST00000489861 ZMYND8Q9ULU4 1186 aaPredicted RBP9.71□□□□□ -0.86
COL9A1-209ENST00000489861 SH3TC1Q8TE82 1336 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 IRS2Q9Y4H2 1338 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.86
COL9A1-209ENST00000489861 MGAMO43451 1857 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 MUC6Q6W4X9 2439 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 USP2O75604 605 aaPredicted RBP9.7□□□□□ -0.86
COL9A1-209ENST00000489861 GRK4P32298 578 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 MAGEA10P43363 369 aaPredicted RBP9.7□□□□□ -0.86
COL9A1-209ENST00000489861 SF3B3Q15393 1217 aaKnown RBP9.7□□□□□ -0.86
COL9A1-209ENST00000489861 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
COL9A1-209ENST00000489861 DACT2Q5SW24 774 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 ZBED3Q96IU2 234 aaPredicted RBP9.7□□□□□ -0.86
COL9A1-209ENST00000489861 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 DEFB129Q9H1M3 183 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 RIPOR2Q9Y4F9 1068 aa9.7□□□□□ -0.86
COL9A1-209ENST00000489861 UNCXA6NJT0 531 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
COL9A1-209ENST00000489861 SGPL1O95470 568 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 GNRH1P01148 92 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 SYN1P17600 705 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 PRMT2P55345 433 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 PDIA6Q15084 440 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 TAF7Q15545 349 aaPredicted RBP9.69□□□□□ -0.86
COL9A1-209ENST00000489861 C7orf61Q8IZ16 206 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 TRIM47Q96LD4 638 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 SRRDQ9UH36 339 aa9.69□□□□□ -0.86
COL9A1-209ENST00000489861 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
COL9A1-209ENST00000489861 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms