RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 PRDM6Q9NQX0 595 aa19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 PODXL2Q9NZ53 605 aa19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 ANKIB1Q9P2G1 1089 aa19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 SF3B3Q15393 1217 aaKnown RBP19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 Q7L0L9 218 aa19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 APOBEC3FQ8IUX4 373 aaKnown RBP19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 NKX2-3Q8TAU0 364 aa19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 GGA1Q9UJY5 639 aa19.37■□□□□ 0.69
SDHAF3-204ENST00000489852 RPS8P62241 208 aaKnown RBP19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 MAP3K11Q16584 847 aa19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 UBE2Q1Q7Z7E8 422 aa19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 STAP2Q9UGK3 403 aa19.36■□□□□ 0.69
SDHAF3-204ENST00000489852 TESPA1A2RU30 521 aaPredicted RBP19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 PPP1R12BO60237 982 aaPredicted RBP19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 SASH1O94885 1247 aa19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 MTFR1Q15390 333 aa19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 COL4A1P02462 1669 aa19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 VCANP13611 3396 aa19.35■□□□□ 0.69
SDHAF3-204ENST00000489852 PODNQ7Z5L7 613 aa19.34■□□□□ 0.69
SDHAF3-204ENST00000489852 MTMR10Q9NXD2 777 aa19.34■□□□□ 0.69
SDHAF3-204ENST00000489852 ZNF646O15015 1829 aaPredicted RBP19.34■□□□□ 0.69
SDHAF3-204ENST00000489852 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
SDHAF3-204ENST00000489852 GJA5P36382 358 aa19.33■□□□□ 0.68
SDHAF3-204ENST00000489852 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
SDHAF3-204ENST00000489852 EVI5O60447 810 aa19.32■□□□□ 0.68
SDHAF3-204ENST00000489852 GJA8P48165 433 aa19.32■□□□□ 0.68
SDHAF3-204ENST00000489852 PDIA6Q15084 440 aa19.32■□□□□ 0.68
SDHAF3-204ENST00000489852 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
SDHAF3-204ENST00000489852 ANXA1P04083 346 aa19.31■□□□□ 0.68
SDHAF3-204ENST00000489852 TAF1CQ15572 869 aaPredicted RBP19.31■□□□□ 0.68
SDHAF3-204ENST00000489852 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
SDHAF3-204ENST00000489852 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 KIF22Q14807 665 aa19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 PROSER3Q2NL68 480 aa19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 COPS6Q7L5N1 327 aa19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 ARHGAP39Q9C0H5 1083 aa19.3■□□□□ 0.68
SDHAF3-204ENST00000489852 COL1A1P02452 1464 aaPredicted RBP19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 GJB1P08034 283 aa19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 PRMT2P55345 433 aa19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 DACT2Q5SW24 774 aa19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 FBXW7Q969H0 707 aa19.29■□□□□ 0.68
SDHAF3-204ENST00000489852 MYO3BQ8WXR4 1341 aa19.28■□□□□ 0.68
SDHAF3-204ENST00000489852 FARP2O94887 1054 aaPredicted RBP19.28■□□□□ 0.68
SDHAF3-204ENST00000489852 GNRH1P01148 92 aa19.28■□□□□ 0.68
SDHAF3-204ENST00000489852 IREB2P48200 963 aaKnown RBP19.28■□□□□ 0.68
SDHAF3-204ENST00000489852 MMP14P50281 582 aa19.28■□□□□ 0.68
SDHAF3-204ENST00000489852 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.68
SDHAF3-204ENST00000489852 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
SDHAF3-204ENST00000489852 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
SDHAF3-204ENST00000489852 ZSWIM8A7E2V4 1837 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 U2AF1L5P0DN76 240 aaPredicted RBP19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 CCL5P13501 91 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 COL9A1P20849 921 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 BMP8BP34820 402 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 LACTBP83111 547 aaPredicted RBP19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 U2AF1Q01081 240 aaKnown RBP eCLIP19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 SUPT20HL1Q3ZLR7 823 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 ANKRD13AQ8IZ07 590 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 MS4A4AQ96JQ5 239 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 RNF208Q9H0X6 261 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
SDHAF3-204ENST00000489852 LRIT3Q3SXY7 679 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 RTL5Q5HYW3 569 aaPredicted RBP19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 BRI3BPQ8WY22 251 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 OPTNQ96CV9 577 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 SEC31BQ9NQW1 1179 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 PPP2R3BQ9Y5P8 575 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 XDHP47989 1333 aa19.25■□□□□ 0.67
SDHAF3-204ENST00000489852 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 CNGB1Q14028 1251 aaPredicted RBP19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 STRIP1Q5VSL9 837 aa19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 ZBED3Q96IU2 234 aaPredicted RBP19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 GDF15Q99988 308 aa19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 ELP3Q9H9T3 547 aa19.24■□□□□ 0.67
SDHAF3-204ENST00000489852 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 IRS4O14654 1257 aaPredicted RBP19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 GRK4P32298 578 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 CCL15Q16663 113 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 KIAA0825Q8IV33 1275 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 U2AF1L4Q8WU68 220 aaKnown RBP19.23■□□□□ 0.67
SDHAF3-204ENST00000489852 TLR2O60603 784 aa19.22■□□□□ 0.67
SDHAF3-204ENST00000489852 ECM2O94769 699 aaPredicted RBP19.22■□□□□ 0.67
SDHAF3-204ENST00000489852 BCAMP50895 628 aa19.22■□□□□ 0.67
SDHAF3-204ENST00000489852 RPTORQ8N122 1335 aa19.22■□□□□ 0.67
SDHAF3-204ENST00000489852 GTF2A2P52657 109 aa19.21■□□□□ 0.67
SDHAF3-204ENST00000489852 NBPF12Q5TAG4 269 aaPredicted RBP19.21■□□□□ 0.67
SDHAF3-204ENST00000489852 RAET1EQ8TD07 263 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms