RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HSP90AB3PQ58FF7 597 aa19.98■□□□□ 0.79
UFD1-209ENST00000489406 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
UFD1-209ENST00000489406 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
UFD1-209ENST00000489406 GJA5P36382 358 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 LRP10Q7Z4F1 713 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 UBE2Q1Q7Z7E8 422 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 OGFOD1Q8N543 542 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 MXD3Q9BW11 206 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 GGA1Q9UJY5 639 aa19.97■□□□□ 0.79
UFD1-209ENST00000489406 ANXA1P04083 346 aa19.96■□□□□ 0.79
UFD1-209ENST00000489406 RPS8P62241 208 aaKnown RBP19.96■□□□□ 0.79
UFD1-209ENST00000489406 SF3B3Q15393 1217 aaKnown RBP19.96■□□□□ 0.79
UFD1-209ENST00000489406 GPR153Q6NV75 609 aa19.96■□□□□ 0.79
UFD1-209ENST00000489406 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
UFD1-209ENST00000489406 MTMR10Q9NXD2 777 aa19.96■□□□□ 0.79
UFD1-209ENST00000489406 PSME4Q14997 1843 aa19.96■□□□□ 0.79
UFD1-209ENST00000489406 ERBB4Q15303 1308 aa19.96■□□□□ 0.79
UFD1-209ENST00000489406 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
UFD1-209ENST00000489406 LAMB1P07942 1786 aa19.94■□□□□ 0.78
UFD1-209ENST00000489406 TESPA1A2RU30 521 aaPredicted RBP19.94■□□□□ 0.78
UFD1-209ENST00000489406 PPP1R12BO60237 982 aaPredicted RBP19.94■□□□□ 0.78
UFD1-209ENST00000489406 PDIA6Q15084 440 aa19.94■□□□□ 0.78
UFD1-209ENST00000489406 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
UFD1-209ENST00000489406 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
UFD1-209ENST00000489406 ARHGAP39Q9C0H5 1083 aa19.94■□□□□ 0.78
UFD1-209ENST00000489406 HSPA5P11021 654 aaKnown RBP19.93■□□□□ 0.78
UFD1-209ENST00000489406 AIMP1Q12904 312 aaKnown RBP19.93■□□□□ 0.78
UFD1-209ENST00000489406 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
UFD1-209ENST00000489406 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
UFD1-209ENST00000489406 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
UFD1-209ENST00000489406 NKX2-3Q8TAU0 364 aa19.93■□□□□ 0.78
UFD1-209ENST00000489406 FAM89AQ96GI7 184 aa19.93■□□□□ 0.78
UFD1-209ENST00000489406 ZFYVE28Q9HCC9 887 aa19.93■□□□□ 0.78
UFD1-209ENST00000489406 VCANP13611 3396 aa19.92■□□□□ 0.78
UFD1-209ENST00000489406 EVI5O60447 810 aa19.92■□□□□ 0.78
UFD1-209ENST00000489406 EIF2S2P20042 333 aaKnown RBP19.92■□□□□ 0.78
UFD1-209ENST00000489406 GJA8P48165 433 aa19.91■□□□□ 0.78
UFD1-209ENST00000489406 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
UFD1-209ENST00000489406 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
UFD1-209ENST00000489406 DEFB129Q9H1M3 183 aa19.91■□□□□ 0.78
UFD1-209ENST00000489406 ZNF646O15015 1829 aaPredicted RBP19.9■□□□□ 0.78
UFD1-209ENST00000489406 ECM2O94769 699 aaPredicted RBP19.9■□□□□ 0.78
UFD1-209ENST00000489406 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
UFD1-209ENST00000489406 DACT2Q5SW24 774 aa19.9■□□□□ 0.78
UFD1-209ENST00000489406 SSC5DA1L4H1 1573 aa19.9■□□□□ 0.78
UFD1-209ENST00000489406 ZSWIM8A7E2V4 1837 aa19.9■□□□□ 0.78
UFD1-209ENST00000489406 GJB1P08034 283 aa19.89■□□□□ 0.77
UFD1-209ENST00000489406 KIF22Q14807 665 aa19.89■□□□□ 0.77
UFD1-209ENST00000489406 RTL5Q5HYW3 569 aaPredicted RBP19.89■□□□□ 0.77
UFD1-209ENST00000489406 SEC31BQ9NQW1 1179 aa19.89■□□□□ 0.77
UFD1-209ENST00000489406 UNCXA6NJT0 531 aa19.88■□□□□ 0.77
UFD1-209ENST00000489406 FARP2O94887 1054 aaPredicted RBP19.88■□□□□ 0.77
UFD1-209ENST00000489406 COL9A1P20849 921 aa19.88■□□□□ 0.77
UFD1-209ENST00000489406 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
UFD1-209ENST00000489406 MS4A4AQ96JQ5 239 aa19.88■□□□□ 0.77
UFD1-209ENST00000489406 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
UFD1-209ENST00000489406 CCL5P13501 91 aa19.87■□□□□ 0.77
UFD1-209ENST00000489406 LACTBP83111 547 aaPredicted RBP19.87■□□□□ 0.77
UFD1-209ENST00000489406 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.771e-8■■■□□ 18.7
UFD1-209ENST00000489406 BRI3BPQ8WY22 251 aa19.87■□□□□ 0.77
UFD1-209ENST00000489406 SPTBN5Q9NRC6 3674 aaKnown RBP19.87■□□□□ 0.77
UFD1-209ENST00000489406 MYO3BQ8WXR4 1341 aa19.86■□□□□ 0.77
UFD1-209ENST00000489406 USP2O75604 605 aaPredicted RBP19.86■□□□□ 0.77
UFD1-209ENST00000489406 IREB2P48200 963 aaKnown RBP19.86■□□□□ 0.77
UFD1-209ENST00000489406 OPTNQ96CV9 577 aa19.86■□□□□ 0.77
UFD1-209ENST00000489406 GDF15Q99988 308 aa19.86■□□□□ 0.77
UFD1-209ENST00000489406 RNF208Q9H0X6 261 aa19.86■□□□□ 0.77
UFD1-209ENST00000489406 ELP3Q9H9T3 547 aa19.86■□□□□ 0.77
UFD1-209ENST00000489406 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
UFD1-209ENST00000489406 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
UFD1-209ENST00000489406 PRMT2P55345 433 aa19.85■□□□□ 0.77
UFD1-209ENST00000489406 CCL15Q16663 113 aa19.85■□□□□ 0.77
UFD1-209ENST00000489406 ANKRD13AQ8IZ07 590 aa19.85■□□□□ 0.77
UFD1-209ENST00000489406 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
UFD1-209ENST00000489406 ZBED3Q96IU2 234 aaPredicted RBP19.85■□□□□ 0.77
UFD1-209ENST00000489406 XDHP47989 1333 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 IRS4O14654 1257 aaPredicted RBP19.84■□□□□ 0.77
UFD1-209ENST00000489406 PER1O15534 1290 aaPredicted RBP19.84■□□□□ 0.77
UFD1-209ENST00000489406 GNRH1P01148 92 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 BMP8BP34820 402 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 BCAMP50895 628 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 SUPT20HL1Q3ZLR7 823 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 STRIP1Q5VSL9 837 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 KIAA0825Q8IV33 1275 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
UFD1-209ENST00000489406 ATP2B4P23634 1241 aa19.83■□□□□ 0.77
UFD1-209ENST00000489406 GRK4P32298 578 aa19.83■□□□□ 0.77
UFD1-209ENST00000489406 LRIT3Q3SXY7 679 aa19.83■□□□□ 0.77
UFD1-209ENST00000489406 NBPF12Q5TAG4 269 aaPredicted RBP19.83■□□□□ 0.77
UFD1-209ENST00000489406 U2AF1L4Q8WU68 220 aaKnown RBP19.83■□□□□ 0.77
UFD1-209ENST00000489406 BIN2Q9UBW5 565 aaPredicted RBP19.83■□□□□ 0.77
UFD1-209ENST00000489406 ATP5J2-PTCD1G3V325 749 aa19.82■□□□□ 0.76
UFD1-209ENST00000489406 MMP14P50281 582 aa19.82■□□□□ 0.76
UFD1-209ENST00000489406 CNKSR2Q8WXI2 1034 aa19.82■□□□□ 0.76
UFD1-209ENST00000489406 CFAP53Q96M91 514 aa19.82■□□□□ 0.76
UFD1-209ENST00000489406 RPTORQ8N122 1335 aa19.81■□□□□ 0.76
UFD1-209ENST00000489406 TLR2O60603 784 aa19.81■□□□□ 0.76
UFD1-209ENST00000489406 RAET1EQ8TD07 263 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms