RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
NINJ1-204ENST00000489274 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
NINJ1-204ENST00000489274 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
NINJ1-204ENST00000489274 APPBP2Q92624 585 aa17.36■□□□□ 0.37
NINJ1-204ENST00000489274 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
NINJ1-204ENST00000489274 SLC5A1P13866 664 aa17.35■□□□□ 0.37
NINJ1-204ENST00000489274 COL9A3Q14050 684 aaPredicted RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 TOB2Q14106 344 aaPredicted RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 SLC10A5Q5PT55 438 aa17.35■□□□□ 0.37
NINJ1-204ENST00000489274 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 NHSQ6T4R5 1651 aa17.35■□□□□ 0.37
NINJ1-204ENST00000489274 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 KCNQ4P56696 695 aa17.35■□□□□ 0.37
NINJ1-204ENST00000489274 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
NINJ1-204ENST00000489274 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
NINJ1-204ENST00000489274 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 HSPA1LP34931 641 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 AFF2P51816 1311 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 LAMB2P55268 1798 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 ST3GAL1Q11201 340 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
NINJ1-204ENST00000489274 PHKA1P46020 1223 aa17.33■□□□□ 0.37
NINJ1-204ENST00000489274 WASHC4Q2M389 1173 aa17.33■□□□□ 0.37
NINJ1-204ENST00000489274 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.37
NINJ1-204ENST00000489274 PI16Q6UXB8 463 aa17.33■□□□□ 0.37
NINJ1-204ENST00000489274 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.37
NINJ1-204ENST00000489274 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.37
NINJ1-204ENST00000489274 CTNNA3Q9UI47 895 aa17.33■□□□□ 0.37
NINJ1-204ENST00000489274 CCNL1Q9UK58 526 aaPredicted RBP17.33■□□□□ 0.37
NINJ1-204ENST00000489274 ISY1Q9ULR0 285 aaKnown RBP17.33■□□□□ 0.37
NINJ1-204ENST00000489274 ATRNO75882 1429 aa17.33■□□□□ 0.36
NINJ1-204ENST00000489274 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
NINJ1-204ENST00000489274 TRPC5Q9UL62 973 aaPredicted RBP17.33■□□□□ 0.36
NINJ1-204ENST00000489274 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.36
NINJ1-204ENST00000489274 BTAF1O14981 1849 aa17.33■□□□□ 0.36
NINJ1-204ENST00000489274 SYT1P21579 422 aa17.32■□□□□ 0.36
NINJ1-204ENST00000489274 ADD2P35612 726 aa17.32■□□□□ 0.36
NINJ1-204ENST00000489274 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
NINJ1-204ENST00000489274 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
NINJ1-204ENST00000489274 DHX32Q7L7V1 743 aaKnown RBP17.32■□□□□ 0.36
NINJ1-204ENST00000489274 AKAP11Q9UKA4 1901 aa17.32■□□□□ 0.36
NINJ1-204ENST00000489274 STX6O43752 255 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 ZSCAN22P10073 491 aaPredicted RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 GJB2P29033 226 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 NECAB1Q8N987 351 aa17.31■□□□□ 0.36
NINJ1-204ENST00000489274 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 PIH1D3Q9NQM4 214 aaKnown RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
NINJ1-204ENST00000489274 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 GNPATO15228 680 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 FOXP2O15409 715 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
NINJ1-204ENST00000489274 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 SCN7AQ01118 1682 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 E7EWF7 191 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 ZPR1O75312 459 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 CHRNDQ07001 517 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 SLC9C2Q5TAH2 1124 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 Q6ZUG5 572 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
NINJ1-204ENST00000489274 GPAA1O43292 621 aa17.29■□□□□ 0.36
NINJ1-204ENST00000489274 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
NINJ1-204ENST00000489274 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
NINJ1-204ENST00000489274 AGXT2Q9BYV1 514 aa17.29■□□□□ 0.36
NINJ1-204ENST00000489274 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
NINJ1-204ENST00000489274 C3orf67Q6ZVT6 689 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 FBXL16Q8N461 479 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 FGAP02671 866 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
NINJ1-204ENST00000489274 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
NINJ1-204ENST00000489274 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
NINJ1-204ENST00000489274 SRP68Q9UHB9 627 aaKnown RBP17.28■□□□□ 0.36
NINJ1-204ENST00000489274 MTMR6Q9Y217 621 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
NINJ1-204ENST00000489274 TCRBV5S4A2TA0A5A2 114 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 IDH1O75874 414 aaKnown RBP17.27■□□□□ 0.36
NINJ1-204ENST00000489274 F13A1P00488 732 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 PDE6AP16499 860 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 PDCP20941 246 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
NINJ1-204ENST00000489274 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 CHAMP1Q96JM3 812 aa17.27■□□□□ 0.36
NINJ1-204ENST00000489274 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 SNAP23O00161 211 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms