RNA–Protein interactions for RNA: ENST00000489178.1

ALCAM-208, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 783 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-208ENST00000489178 TREHO43280 583 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 SMNDC1O75940 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
ALCAM-208ENST00000489178 MAPK1P28482 360 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 USPL1Q5W0Q7 1092 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 DMRTC2Q8IXT2 367 aaPredicted RBP9.45□□□□□ -0.9
ALCAM-208ENST00000489178 TMEM102Q8N9M5 508 aaPredicted RBP9.45□□□□□ -0.9
ALCAM-208ENST00000489178 ASB16Q96NS5 453 aa9.45□□□□□ -0.9
ALCAM-208ENST00000489178 CPNE3O75131 537 aaKnown RBP9.44□□□□□ -0.9
ALCAM-208ENST00000489178 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
ALCAM-208ENST00000489178 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
ALCAM-208ENST00000489178 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
ALCAM-208ENST00000489178 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
ALCAM-208ENST00000489178 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
ALCAM-208ENST00000489178 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
ALCAM-208ENST00000489178 EIF1AYO14602 144 aaKnown RBP9.43□□□□□ -0.9
ALCAM-208ENST00000489178 TRIM28Q13263 835 aaKnown RBP9.43□□□□□ -0.9
ALCAM-208ENST00000489178 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
ALCAM-208ENST00000489178 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
ALCAM-208ENST00000489178 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
ALCAM-208ENST00000489178 OSMRQ99650 979 aa9.43□□□□□ -0.9
ALCAM-208ENST00000489178 TM4SF5O14894 197 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 TRPA1O75762 1119 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
ALCAM-208ENST00000489178 PLA2G4EQ3MJ16 856 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 KIAA0319Q5VV43 1072 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 BHLHE41Q9C0J9 482 aaPredicted RBP9.42□□□□□ -0.9
ALCAM-208ENST00000489178 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
ALCAM-208ENST00000489178 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
ALCAM-208ENST00000489178 PDE2AO00408 941 aaPredicted RBP9.41□□□□□ -0.9
ALCAM-208ENST00000489178 DEAF1O75398 565 aaPredicted RBP9.41□□□□□ -0.9
ALCAM-208ENST00000489178 ELNP15502 786 aa9.41□□□□□ -0.9
ALCAM-208ENST00000489178 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
ALCAM-208ENST00000489178 NISCHQ9Y2I1 1504 aa9.41□□□□□ -0.9
ALCAM-208ENST00000489178 A0A1W2PP55 124 aa9.4□□□□□ -0.9
ALCAM-208ENST00000489178 PLCB3Q01970 1234 aa9.4□□□□□ -0.9
ALCAM-208ENST00000489178 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
ALCAM-208ENST00000489178 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
ALCAM-208ENST00000489178 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
ALCAM-208ENST00000489178 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
ALCAM-208ENST00000489178 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
ALCAM-208ENST00000489178 SELPP16109 830 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 PTPRAP18433 802 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 CDC27P30260 824 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 RAC1P63000 192 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 CCDC74AQ96AQ1 378 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 TCF12Q99081 682 aa9.39□□□□□ -0.91
ALCAM-208ENST00000489178 DLL1O00548 723 aa9.38□□□□□ -0.91
ALCAM-208ENST00000489178 GRIK4Q16099 956 aa9.38□□□□□ -0.91
ALCAM-208ENST00000489178 ENOX2Q16206 610 aaKnown RBP9.38□□□□□ -0.91
ALCAM-208ENST00000489178 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
ALCAM-208ENST00000489178 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
ALCAM-208ENST00000489178 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
ALCAM-208ENST00000489178 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
ALCAM-208ENST00000489178 EPHA1P21709 976 aa9.37□□□□□ -0.91
ALCAM-208ENST00000489178 CHRNA4P43681 627 aa9.37□□□□□ -0.91
ALCAM-208ENST00000489178 LENG1Q96BZ8 264 aaPredicted RBP9.37□□□□□ -0.91
ALCAM-208ENST00000489178 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
ALCAM-208ENST00000489178 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
ALCAM-208ENST00000489178 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
ALCAM-208ENST00000489178 VN1R5Q7Z5H4 357 aa9.36□□□□□ -0.91
ALCAM-208ENST00000489178 BSNDQ8WZ55 320 aa9.36□□□□□ -0.91
ALCAM-208ENST00000489178 LINC01387J3KSC0 135 aa9.35□□□□□ -0.91
ALCAM-208ENST00000489178 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
ALCAM-208ENST00000489178 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
ALCAM-208ENST00000489178 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
ALCAM-208ENST00000489178 WNT8BQ93098 351 aa9.35□□□□□ -0.91
ALCAM-208ENST00000489178 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
ALCAM-208ENST00000489178 C9orf172C9J069 976 aa9.34□□□□□ -0.91
ALCAM-208ENST00000489178 H3BRJ5 948 aa9.34□□□□□ -0.91
ALCAM-208ENST00000489178 IGHA1P01876 353 aa9.34□□□□□ -0.91
ALCAM-208ENST00000489178 PROCP04070 461 aa9.34□□□□□ -0.91
ALCAM-208ENST00000489178 GALNT11Q8NCW6 608 aa9.34□□□□□ -0.91
ALCAM-208ENST00000489178 GRIA4P48058 902 aa9.33□□□□□ -0.92
ALCAM-208ENST00000489178 ADGRE1Q14246 886 aa9.33□□□□□ -0.92
ALCAM-208ENST00000489178 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
ALCAM-208ENST00000489178 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
ALCAM-208ENST00000489178 GLIS3Q8NEA6 775 aa9.33□□□□□ -0.92
ALCAM-208ENST00000489178 EPS8L3Q8TE67 593 aaKnown RBP9.33□□□□□ -0.92
ALCAM-208ENST00000489178 LIN7BQ9HAP6 207 aa9.33□□□□□ -0.92
ALCAM-208ENST00000489178 A0A096LPE4 126 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 METTL12A8MUP2 240 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 FSCN2O14926 492 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 APBA3O96018 575 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 ITPKAP23677 461 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 ZNF428Q96B54 188 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
ALCAM-208ENST00000489178 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
ALCAM-208ENST00000489178 PTPN12Q05209 780 aaKnown RBP9.31□□□□□ -0.92
ALCAM-208ENST00000489178 TMEM130Q8N3G9 435 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms