RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 TRIM33Q9UPN9 1127 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.11□□□□□ -1.27
SSR1-209ENST00000488834 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
SSR1-209ENST00000488834 ACPPP15309 386 aa7.1□□□□□ -1.27
SSR1-209ENST00000488834 USPL1Q5W0Q7 1092 aa7.1□□□□□ -1.27
SSR1-209ENST00000488834 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
SSR1-209ENST00000488834 CSRNP1Q96S65 589 aa7.1□□□□□ -1.27
SSR1-209ENST00000488834 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
SSR1-209ENST00000488834 PNMA6FA0A0J9YX94 578 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 TREHO43280 583 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
SSR1-209ENST00000488834 TRPA1O75762 1119 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 CDC27P30260 824 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 CDC25BP30305 580 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 CABP4P57796 275 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 GALNT12Q8IXK2 581 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 CCDC74AQ96AQ1 378 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 ZKSCAN3Q9BRR0 538 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 LATS2Q9NRM7 1088 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 NLRP2Q9NX02 1062 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
SSR1-209ENST00000488834 IGHA2P01877 340 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 GRIK5Q16478 980 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 FAM117BQ6P1L5 589 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 ALYREFQ86V81 257 aaKnown RBP7.08□□□□□ -1.28
SSR1-209ENST00000488834 POP1Q99575 1024 aaKnown RBP7.08□□□□□ -1.28
SSR1-209ENST00000488834 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 EHD4Q9H223 541 aa7.08□□□□□ -1.28
SSR1-209ENST00000488834 ANKRD33BA6NCL7 494 aa7.07□□□□□ -1.28
SSR1-209ENST00000488834 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
SSR1-209ENST00000488834 SPATA31C1P0DKV0 1188 aa7.07□□□□□ -1.28
SSR1-209ENST00000488834 HHIPQ96QV1 700 aa7.07□□□□□ -1.28
SSR1-209ENST00000488834 SPOCK3Q9BQ16 436 aa7.07□□□□□ -1.28
SSR1-209ENST00000488834 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 A0A1W2PP55 124 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 APBA3O96018 575 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 CHRNA4P43681 627 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 DSC3Q14574 896 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 PEAR1Q5VY43 1037 aaPredicted RBP7.06□□□□□ -1.28
SSR1-209ENST00000488834 TMEM102Q8N9M5 508 aaPredicted RBP7.06□□□□□ -1.28
SSR1-209ENST00000488834 LIN7BQ9HAP6 207 aa7.06□□□□□ -1.28
SSR1-209ENST00000488834 SH2B1Q9NRF2 756 aaPredicted RBP7.06□□□□□ -1.28
SSR1-209ENST00000488834 LINC01387J3KSC0 135 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 FMR1Q06787 632 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSR1-209ENST00000488834 ENOX2Q16206 610 aaKnown RBP7.05□□□□□ -1.28
SSR1-209ENST00000488834 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 DTWD1Q8N5C7 304 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 BSNDQ8WZ55 320 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 NXPE3Q969Y0 559 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 PPP4R2Q9NY27 417 aa7.05□□□□□ -1.28
SSR1-209ENST00000488834 NFKBIEO00221 500 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 P4HBP07237 508 aaKnown RBP7.04□□□□□ -1.28
SSR1-209ENST00000488834 ELNP15502 786 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
SSR1-209ENST00000488834 ALG1LQ6GMV1 187 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 CD163Q86VB7 1156 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 MAP4K3Q8IVH8 894 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 FMR1NBQ8N0W7 255 aaPredicted RBP7.04□□□□□ -1.28
SSR1-209ENST00000488834 EPS8L3Q8TE67 593 aaKnown RBP7.04□□□□□ -1.28
SSR1-209ENST00000488834 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 TRAK1Q9UPV9 953 aa7.04□□□□□ -1.28
SSR1-209ENST00000488834 METTL12A8MUP2 240 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 LDHBP07195 334 aaKnown RBP7.03□□□□□ -1.28
SSR1-209ENST00000488834 EPHA1P21709 976 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 BAG6P46379 1132 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 ARL4DP49703 201 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 FGD1P98174 961 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 TRIM26Q12899 539 aaPredicted RBP7.03□□□□□ -1.28
SSR1-209ENST00000488834 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
SSR1-209ENST00000488834 KIAA0319Q5VV43 1072 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 FBF1Q8TES7 1133 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
SSR1-209ENST00000488834 ADAM19Q9H013 955 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 SRA1Q9HD15 236 aaKnown RBP7.03□□□□□ -1.28
SSR1-209ENST00000488834 USP21Q9UK80 565 aa7.03□□□□□ -1.28
SSR1-209ENST00000488834 C1QTNF9BB2RNN3 333 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 H3BRJ5 948 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 ERCC3P19447 782 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 IKBKEQ14164 716 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 GRIK4Q16099 956 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
SSR1-209ENST00000488834 A0A096LPE4 126 aa7.01□□□□□ -1.29
SSR1-209ENST00000488834 A0A1W2PPZ6 126 aa7.01□□□□□ -1.29
SSR1-209ENST00000488834 SUZ12Q15022 739 aaKnown RBP7.01□□□□□ -1.29
SSR1-209ENST00000488834 PI16Q6UXB8 463 aa7.01□□□□□ -1.29
SSR1-209ENST00000488834 WWC3Q9ULE0 1092 aa7.01□□□□□ -1.29
SSR1-209ENST00000488834 SPG7Q9UQ90 795 aa7.01□□□□□ -1.29
SSR1-209ENST00000488834 FSCN2O14926 492 aa7□□□□□ -1.29
SSR1-209ENST00000488834 PIP4K2BP78356 416 aa7□□□□□ -1.29
SSR1-209ENST00000488834 GRM2Q14416 872 aa7□□□□□ -1.29
SSR1-209ENST00000488834 COL19A1Q14993 1142 aa7□□□□□ -1.29
SSR1-209ENST00000488834 SPRED3Q2MJR0 410 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms