RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RESTQ13127 1097 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 NOLC1Q14978 699 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLIC4-202ENST00000488683 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 ELP1O95163 1332 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 PALLDQ8WX93 1383 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 PTPDC1A2A3K4 754 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 CCDC192P0DO97 292 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 CBX8Q9HC52 389 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 PAPPAQ13219 1627 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 RXRAP19793 462 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 GOLPH3LQ9H4A5 285 aa14.96□□□□□ -0.01
CLIC4-202ENST00000488683 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
CLIC4-202ENST00000488683 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
CLIC4-202ENST00000488683 NSUN7Q8NE18 718 aaKnown RBP14.95□□□□□ -0.02
CLIC4-202ENST00000488683 EYA2O00167 538 aa14.95□□□□□ -0.02
CLIC4-202ENST00000488683 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
CLIC4-202ENST00000488683 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
CLIC4-202ENST00000488683 DNAJC10Q8IXB1 793 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 FOXP2O15409 715 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 POLR3DP05423 398 aaPredicted RBP14.94□□□□□ -0.02
CLIC4-202ENST00000488683 IL15P40933 162 aaPredicted RBP14.94□□□□□ -0.02
CLIC4-202ENST00000488683 ZAP70P43403 619 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 ARID5BQ14865 1188 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 HLFQ16534 295 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 ZMYM1Q5SVZ6 1142 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 DRC7Q8IY82 874 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 HELBQ8NG08 1087 aaPredicted RBP14.94□□□□□ -0.02
CLIC4-202ENST00000488683 USP28Q96RU2 1077 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
CLIC4-202ENST00000488683 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 CCDC191Q8NCU4 936 aa14.94□□□□□ -0.02
CLIC4-202ENST00000488683 SCAND2PQ9GZW5 306 aaPredicted RBP14.94□□□□□ -0.02
CLIC4-202ENST00000488683 TOGARAM1Q9Y4F4 1720 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 C11orf57Q6ZUT1 292 aaPredicted RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 SYTL4Q96C24 671 aaPredicted RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 XAGE2Q96GT9 111 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 MYH15Q9Y2K3 1946 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 RRP9O43818 475 aaKnown RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 ILDR1Q86SU0 546 aaPredicted RBP14.93□□□□□ -0.02
CLIC4-202ENST00000488683 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 GPR108Q9NPR9 543 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 HELLSQ9NRZ9 838 aa14.93□□□□□ -0.02
CLIC4-202ENST00000488683 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
CLIC4-202ENST00000488683 EXOSC10Q01780 885 aaKnown RBP14.92□□□□□ -0.02
CLIC4-202ENST00000488683 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
CLIC4-202ENST00000488683 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 SMARCC2Q8TAQ2 1214 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 PIBF1Q8WXW3 757 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 AIFM3Q96NN9 605 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 UBE2Q2LH0YL09 131 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 PFKFB2O60825 505 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 IL2RBP14784 551 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
CLIC4-202ENST00000488683 EVA1CP58658 441 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 TAF7LQ5H9L4 462 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 FAM200AQ8TCP9 573 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 DSCC1Q9BVC3 393 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 TRIM5Q9C035 493 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 TNS2Q63HR2 1409 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 NWD2Q9ULI1 1742 aa14.92□□□□□ -0.02
CLIC4-202ENST00000488683 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
CLIC4-202ENST00000488683 TERF1P54274 439 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 ISM2Q6H9L7 571 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 CCAR1Q8IX12 1150 aaKnown RBP14.91□□□□□ -0.02
CLIC4-202ENST00000488683 FDPSP14324 419 aaKnown RBP14.91□□□□□ -0.02
CLIC4-202ENST00000488683 SASS6Q6UVJ0 657 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 ISCA1Q9BUE6 129 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 CEP126Q9P2H0 1117 aa14.91□□□□□ -0.02
CLIC4-202ENST00000488683 A0A1B0GVL5 298 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 FGAP02671 866 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 ZNF165P49910 485 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 CCDC144BQ3MJ40 725 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 AGXT2Q9BYV1 514 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 GREM2Q9H772 168 aa14.9□□□□□ -0.02
CLIC4-202ENST00000488683 CIAO1O76071 339 aa14.89□□□□□ -0.03
CLIC4-202ENST00000488683 ME1P48163 572 aa14.89□□□□□ -0.03
CLIC4-202ENST00000488683 RBM43Q6ZSC3 357 aaKnown RBP14.89□□□□□ -0.03
CLIC4-202ENST00000488683 PIGBQ92521 554 aa14.89□□□□□ -0.03
CLIC4-202ENST00000488683 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
CLIC4-202ENST00000488683 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
CLIC4-202ENST00000488683 TCIRG1Q13488 830 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 MYL10Q9BUA6 226 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 CLIC4Q9Y696 253 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 MYO5AQ9Y4I1 1855 aaKnown RBP14.88□□□□□ -0.03
CLIC4-202ENST00000488683 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 SPEF2Q9C093 1822 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 HMGB1P09429 215 aaKnown RBP14.88□□□□□ -0.03
CLIC4-202ENST00000488683 PTPN21Q16825 1174 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 CARD10Q9BWT7 1032 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
CLIC4-202ENST00000488683 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
CLIC4-202ENST00000488683 KLF18A0A0U1RQI7 1052 aa14.87□□□□□ -0.03
CLIC4-202ENST00000488683 BIN1O00499 593 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms