RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 MCM9Q9NXL9 1143 aa13.52□□□□□ -0.25
LDLRAP1-207ENST00000488127 RBM27Q9P2N5 1060 aaKnown RBP13.52□□□□□ -0.25
LDLRAP1-207ENST00000488127 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 USP8P40818 1118 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 XAGE2Q96GT9 111 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 HDAC9Q9UKV0 1011 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 UNC13BO14795 1591 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 GDPD2Q9HCC8 539 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 SYNMO15061 1565 aa13.51□□□□□ -0.25
LDLRAP1-207ENST00000488127 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 H0YIN7 160 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 RNF113AO15541 343 aaKnown RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 ADCY5O95622 1261 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 EYA3Q99504 573 aa13.5□□□□□ -0.25
LDLRAP1-207ENST00000488127 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 AFF2P51816 1311 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 NLRP5P59047 1200 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 LRRIQ1Q96JM4 1722 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 SLC26A6Q9BXS9 759 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 ADGRB3O60242 1522 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 WTAPQ15007 396 aa13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
LDLRAP1-207ENST00000488127 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 EPS15P42566 896 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 MBD4O95243 580 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 OFD1O75665 1012 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 CHMLP26374 656 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 GJB2P29033 226 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 BEND3Q5T5X7 828 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 ESR2Q92731 530 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 E9PCH4 1651 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 URI1O94763 535 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 SEC24BO95487 1268 aa13.48□□□□□ -0.25
LDLRAP1-207ENST00000488127 CPA1P15085 419 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 FAM193AP78312 1265 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 GLI2P10070 1586 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 IGSF3O75054 1194 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 ABCA6Q8N139 1617 aa13.47□□□□□ -0.25
LDLRAP1-207ENST00000488127 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 IFIT1BQ5T764 474 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-207ENST00000488127 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 RXRAP19793 462 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 CTSWP56202 376 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 Q6ZUG5 572 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 FAM227BQ96M60 508 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.26
LDLRAP1-207ENST00000488127 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
LDLRAP1-207ENST00000488127 ZBTB43O43298 467 aa13.45□□□□□ -0.26
LDLRAP1-207ENST00000488127 KIF5BP33176 963 aa13.45□□□□□ -0.26
LDLRAP1-207ENST00000488127 LRRC24Q50LG9 513 aa13.45□□□□□ -0.26
LDLRAP1-207ENST00000488127 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms