RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 CGNL1Q0VF96 1302 aa8.86□□□□□ -0.99
SEC22C-215ENST00000487701 WDR17Q8IZU2 1322 aa8.86□□□□□ -0.99
SEC22C-215ENST00000487701 EVA1CP58658 441 aa8.86□□□□□ -0.99
SEC22C-215ENST00000487701 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
SEC22C-215ENST00000487701 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
SEC22C-215ENST00000487701 RGPD1P0DJD0 1748 aa8.85□□□□□ -0.99
SEC22C-215ENST00000487701 CDC14CA4D256 554 aa8.85□□□□□ -0.99
SEC22C-215ENST00000487701 IL2RAP01589 272 aa8.85□□□□□ -0.99
SEC22C-215ENST00000487701 RRS1Q15050 365 aaKnown RBP8.85□□□□□ -0.99
SEC22C-215ENST00000487701 ESYT1Q9BSJ8 1104 aa8.85□□□□□ -0.99
SEC22C-215ENST00000487701 DISP2A7MBM2 1401 aa8.85□□□□□ -0.99
SEC22C-215ENST00000487701 SENP3-EIF4A1A0A087X0R7 540 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 STAU1O95793 577 aaKnown RBP8.84□□□□□ -0.99
SEC22C-215ENST00000487701 ITGA6P23229 1130 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 HOXC9P31274 260 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 POU4F2Q12837 409 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 EML3Q32P44 896 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 TOM1L2Q6ZVM7 507 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 TCP11L2Q8N4U5 519 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 IP6K1Q92551 441 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 NSD2O96028 1365 aa8.84□□□□□ -0.99
SEC22C-215ENST00000487701 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
SEC22C-215ENST00000487701 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
SEC22C-215ENST00000487701 HDGFL1Q5TGJ6 251 aa8.83□□□□□ -1
SEC22C-215ENST00000487701 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
SEC22C-215ENST00000487701 GRIP2Q9C0E4 1043 aa8.83□□□□□ -1
SEC22C-215ENST00000487701 SMG6Q86US8 1419 aaKnown RBP8.82□□□□□ -1
SEC22C-215ENST00000487701 AMPHP49418 695 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 CENPCQ03188 943 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 KRT27Q7Z3Y8 459 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 LTV1Q96GA3 475 aaPredicted RBP8.82□□□□□ -1
SEC22C-215ENST00000487701 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
SEC22C-215ENST00000487701 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 ETNK1Q9HBU6 452 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 THRAP3Q9Y2W1 955 aaKnown RBP8.82□□□□□ -1
SEC22C-215ENST00000487701 FLT4P35916 1363 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 KIF24Q5T7B8 1368 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 PKD1L3Q7Z443 1732 aa8.82□□□□□ -1
SEC22C-215ENST00000487701 USP17L5A8MUK1 530 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
SEC22C-215ENST00000487701 NCOA4Q13772 614 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 TLR1Q15399 786 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 HSP90AB2PQ58FF8 381 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 FAM182BQ5T319 152 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 TMEM214Q6NUQ4 689 aaKnown RBP8.81□□□□□ -1
SEC22C-215ENST00000487701 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 NLRP2Q9NX02 1062 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 VIRMAQ69YN4 1812 aaKnown RBP8.81□□□□□ -1
SEC22C-215ENST00000487701 INSRP06213 1382 aa8.81□□□□□ -1
SEC22C-215ENST00000487701 TNS2Q63HR2 1409 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 MEGF6O75095 1541 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 GDF10P55107 478 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 GNASQ5JWF2 1037 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
SEC22C-215ENST00000487701 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 TAS1R3Q7RTX0 852 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 NBPF15Q8N660 670 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 XAGE2Q96GT9 111 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 GAS2L1Q99501 681 aaPredicted RBP8.8□□□□□ -1
SEC22C-215ENST00000487701 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 POLKQ9UBT6 870 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 NOD1Q9Y239 953 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 KNSTRNQ9Y448 316 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 NHSQ6T4R5 1651 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 NCAPD2Q15021 1401 aa8.8□□□□□ -1
SEC22C-215ENST00000487701 RREB1Q92766 1687 aa8.79□□□□□ -1
SEC22C-215ENST00000487701 NPC1L1Q9UHC9 1359 aa8.79□□□□□ -1
SEC22C-215ENST00000487701 SV2AQ7L0J3 742 aa8.79□□□□□ -1
SEC22C-215ENST00000487701 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
SEC22C-215ENST00000487701 GLMNQ92990 594 aa8.79□□□□□ -1
SEC22C-215ENST00000487701 BTAF1O14981 1849 aa8.79□□□□□ -1
SEC22C-215ENST00000487701 RGPD3A6NKT7 1758 aaPredicted RBP8.78□□□□□ -1
SEC22C-215ENST00000487701 RGPD4Q7Z3J3 1758 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 ITGB4P16144 1822 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 PPM1GO15355 546 aaPredicted RBP8.78□□□□□ -1
SEC22C-215ENST00000487701 PHKA2P46019 1235 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 SCNN1DP51172 638 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 MORC1Q86VD1 984 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 UCN2Q96RP3 112 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
SEC22C-215ENST00000487701 NUP188Q5SRE5 1749 aa8.77□□□□□ -1
SEC22C-215ENST00000487701 TOGARAM1Q9Y4F4 1720 aa8.77□□□□□ -1
SEC22C-215ENST00000487701 A6NJR5 290 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 LZTS3O60299 673 aaPredicted RBP8.77□□□□□ -1.01
SEC22C-215ENST00000487701 INHAP05111 366 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 GTF2IP78347 998 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 DDB1Q16531 1140 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
SEC22C-215ENST00000487701 NBPF6Q5VWK0 638 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 GPR161Q8N6U8 529 aaKnown RBP8.77□□□□□ -1.01
SEC22C-215ENST00000487701 USHBP1Q8N6Y0 703 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 NBPF4Q96M43 638 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 FHDC1Q9C0D6 1143 aaPredicted RBP8.77□□□□□ -1.01
SEC22C-215ENST00000487701 CUEDC1Q9NWM3 386 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms