RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 DNAAF2Q9NVR5 837 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 IQSEC3Q9UPP2 1182 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 ALS2Q96Q42 1657 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 MSTNO14793 375 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 BACH1O14867 736 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 DKK1O94907 266 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 BAG6P46379 1132 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 CCDC102BQ68D86 513 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 ZNF295-AS1Q8N0V1 137 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 EIF3AQ14152 1382 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-218ENST00000487294 ADGRB1O14514 1584 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 THSD7AQ9UPZ6 1657 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 A0A1B0GTH6 734 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 F11P03951 625 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 LMOD1P29536 600 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 LARGE2Q8N3Y3 721 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 ACDQ96AP0 544 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 CRYBG1Q9Y4K1 1723 aa7.54□□□□□ -1.2
R3HDM1-218ENST00000487294 SPATA31A5Q5VU36 1347 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 SPATA31A7Q8IWB4 1347 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 CNTNAP5Q8WYK1 1306 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 RGPD1P0DJD0 1748 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 THBS1P07996 1170 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 MX2P20592 715 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 EPHA4P54764 986 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 SIX5Q8N196 739 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 PRAM1Q96QH2 718 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 PARD3Q8TEW0 1356 aa7.53□□□□□ -1.2
R3HDM1-218ENST00000487294 TULP4Q9NRJ4 1543 aa7.52□□□□□ -1.2
R3HDM1-218ENST00000487294 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 RASA1P20936 1047 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 MSX1P28360 303 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 MAP2K3P46734 347 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 NIFKQ9BYG3 293 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 BTG4Q9NY30 223 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.21
R3HDM1-218ENST00000487294 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
R3HDM1-218ENST00000487294 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
R3HDM1-218ENST00000487294 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
R3HDM1-218ENST00000487294 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-218ENST00000487294 TNS1Q9HBL0 1735 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-218ENST00000487294 OIP5O43482 229 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 ADAM23O75077 832 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 PTK7Q13308 1070 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 TBCELQ5QJ74 424 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 FAM196AQ6ZSG2 479 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 CAMKK2Q96RR4 588 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 CFHR5Q9BXR6 569 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 CABP1Q9NZU7 370 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 POGKQ9P215 609 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 PARP3Q9Y6F1 533 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 SPATA31A1Q5TZJ5 1347 aa7.5□□□□□ -1.21
R3HDM1-218ENST00000487294 ATP7BP35670 1465 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 M0R2N6 131 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 PROCP04070 461 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 ITGB2P05107 769 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 ATP4AP20648 1035 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 LARP1Q6PKG0 1096 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 ALYREFQ86V81 257 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 SLC9A9Q8IVB4 645 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 AIDAQ96BJ3 306 aa7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
R3HDM1-218ENST00000487294 POLR3AO14802 1390 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L21D6R901 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 RFX1P22670 979 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 CRISPLD1Q9H336 500 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 PRDM11Q9NQV5 511 aa7.48□□□□□ -1.21
R3HDM1-218ENST00000487294 PHF24Q9UPV7 400 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms