RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TRIM17Q9Y577 477 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 LRRC37AA6NMS7 1700 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 CEP290O15078 2479 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 BBOX1O75936 387 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 TTLL7Q6ZT98 887 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 LAMB2P55268 1798 aa11.13□□□□□ -0.63
XRN1-212ENST00000486211 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
XRN1-212ENST00000486211 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
XRN1-212ENST00000486211 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
XRN1-212ENST00000486211 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
XRN1-212ENST00000486211 DBNDD1Q9H9R9 158 aa11.12□□□□□ -0.63
XRN1-212ENST00000486211 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
XRN1-212ENST00000486211 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
XRN1-212ENST00000486211 ANKRD36CQ5JPF3 1778 aa11.11□□□□□ -0.63
XRN1-212ENST00000486211 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
XRN1-212ENST00000486211 PRO3102Q9H379 93 aa11.11□□□□□ -0.63
XRN1-212ENST00000486211 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
XRN1-212ENST00000486211 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 ZNF609O15014 1411 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 DDX60Q8IY21 1712 aaKnown RBP11.1□□□□□ -0.63
XRN1-212ENST00000486211 NUDT7P0C024 238 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 ZNF280AP59817 542 aaPredicted RBP11.1□□□□□ -0.63
XRN1-212ENST00000486211 CAP1Q01518 475 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 SREBF2Q12772 1141 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 SCARF1Q14162 830 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
XRN1-212ENST00000486211 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
XRN1-212ENST00000486211 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 TAF1P21675 1872 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 ECE2O60344 883 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
XRN1-212ENST00000486211 GRAPQ13588 217 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 GRAPLQ8TC17 118 aaPredicted RBP11.09□□□□□ -0.63
XRN1-212ENST00000486211 ZNF333Q96JL9 665 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
XRN1-212ENST00000486211 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
XRN1-212ENST00000486211 PPP1R37O75864 691 aa11.08□□□□□ -0.64
XRN1-212ENST00000486211 GIGYF2Q6Y7W6 1299 aaKnown RBP11.08□□□□□ -0.64
XRN1-212ENST00000486211 KIF6Q6ZMV9 814 aa11.08□□□□□ -0.64
XRN1-212ENST00000486211 PPP1R42Q7Z4L9 355 aa11.08□□□□□ -0.64
XRN1-212ENST00000486211 SCAF8Q9UPN6 1271 aaKnown RBP11.08□□□□□ -0.64
XRN1-212ENST00000486211 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
XRN1-212ENST00000486211 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
XRN1-212ENST00000486211 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 PRAMEF18Q5VWM3 479 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 CD99L2Q8TCZ2 262 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 COL4A1P02462 1669 aa11.07□□□□□ -0.64
XRN1-212ENST00000486211 LAMB1P07942 1786 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 SOX1O00570 391 aaPredicted RBP11.06□□□□□ -0.64
XRN1-212ENST00000486211 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
XRN1-212ENST00000486211 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
XRN1-212ENST00000486211 MCM10Q7L590 875 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 TMC4Q7Z404 712 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 ERO1AQ96HE7 468 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 UTP14AQ9BVJ6 771 aaKnown RBP11.06□□□□□ -0.64
XRN1-212ENST00000486211 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
XRN1-212ENST00000486211 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
XRN1-212ENST00000486211 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
XRN1-212ENST00000486211 GMLQ99445 158 aa11.05□□□□□ -0.64
XRN1-212ENST00000486211 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
XRN1-212ENST00000486211 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
XRN1-212ENST00000486211 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
XRN1-212ENST00000486211 MYL6BP14649 208 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 GPSM2P81274 684 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
XRN1-212ENST00000486211 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 COL25A1Q9BXS0 654 aaPredicted RBP11.04□□□□□ -0.64
XRN1-212ENST00000486211 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 MYOZ2Q9NPC6 264 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 NSFL1CQ9UNZ2 370 aaKnown RBP11.04□□□□□ -0.64
XRN1-212ENST00000486211 PSME4Q14997 1843 aa11.04□□□□□ -0.64
XRN1-212ENST00000486211 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 PBX2P40425 430 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
XRN1-212ENST00000486211 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
XRN1-212ENST00000486211 LAMA3Q16787 3333 aa11.02□□□□□ -0.64
XRN1-212ENST00000486211 MANSC4A6NHS7 340 aaPredicted RBP11.02□□□□□ -0.65
XRN1-212ENST00000486211 INHBEP58166 350 aa11.02□□□□□ -0.65
XRN1-212ENST00000486211 CRHR2Q13324 411 aa11.02□□□□□ -0.65
XRN1-212ENST00000486211 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
XRN1-212ENST00000486211 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
XRN1-212ENST00000486211 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
XRN1-212ENST00000486211 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms