RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FLIIQ13045 1269 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 NLGN2Q8NFZ4 835 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 MRGPRX2Q96LB1 330 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
COPS3-208ENST00000486032 HYPKQ9NX55 129 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 NOB1Q9ULX3 412 aaKnown RBP7.17□□□□□ -1.26
COPS3-208ENST00000486032 SCN7AQ01118 1682 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 BCORQ6W2J9 1755 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 PLIN1O60240 522 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 DDX58O95786 925 aaKnown RBP7.16□□□□□ -1.26
COPS3-208ENST00000486032 IGHA1P01876 353 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 CENPBP07199 599 aaPredicted RBP7.16□□□□□ -1.26
COPS3-208ENST00000486032 CT47B1P0C2W7 299 aaPredicted RBP7.16□□□□□ -1.26
COPS3-208ENST00000486032 SSFA2P28290 1259 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 ALDH1L2Q3SY69 923 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 SLC4A10Q6U841 1118 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 CLUAP1Q96AJ1 413 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
COPS3-208ENST00000486032 MTFR1LQ9H019 292 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 TMEM134Q9H6X4 195 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 SPON1Q9HCB6 807 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 WWC3Q9ULE0 1092 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 UTRNP46939 3433 aa7.16□□□□□ -1.26
COPS3-208ENST00000486032 PI4KAP2A4QPH2 592 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 F6X3S4 739 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 GPTP24298 496 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 DDR1Q08345 913 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 HLFQ16534 295 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 PI4KAP1Q8N8J0 262 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 FLAD1Q8NFF5 587 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 MYD88Q99836 296 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 NARFQ9UHQ1 456 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 TNNQ9UQP3 1299 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 MAP3K2Q9Y2U5 619 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
COPS3-208ENST00000486032 AFDNP55196 1824 aaKnown RBP7.15□□□□□ -1.27
COPS3-208ENST00000486032 ATP5J2-PTCD1G3V325 749 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 NPHP1O15259 732 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 CAMTA2O94983 1202 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 GYS1P13807 737 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 GOLGB1Q14789 3259 aaKnown RBP7.14□□□□□ -1.27
COPS3-208ENST00000486032 GPAT2Q6NUI2 795 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 KSR2Q6VAB6 950 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 LRP10Q7Z4F1 713 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 SLC51AQ86UW1 340 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 N4BP2Q86UW6 1770 aaPredicted RBP7.14□□□□□ -1.27
COPS3-208ENST00000486032 CARMIL3Q8ND23 1372 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 PLBD2Q8NHP8 589 aa7.14□□□□□ -1.27
COPS3-208ENST00000486032 USP42Q9H9J4 1324 aaKnown RBP7.14□□□□□ -1.27
COPS3-208ENST00000486032 NIP7Q9Y221 180 aaKnown RBP eCLIP7.14□□□□□ -1.27
COPS3-208ENST00000486032 SUPT16HQ9Y5B9 1047 aaKnown RBP7.14□□□□□ -1.27
COPS3-208ENST00000486032 KIF16BQ96L93 1317 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 IPO8O15397 1037 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 SLC10A3P09131 477 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 NEXNQ0ZGT2 675 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 RTL5Q5HYW3 569 aaPredicted RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 ZKSCAN2Q63HK3 967 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 TBC1D9BQ66K14 1250 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 FTSJ3Q8IY81 847 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 CCDC24Q8N4L8 307 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 DNAAF4Q8WXU2 420 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 JARID2Q92833 1246 aaPredicted RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 API5Q9BZZ5 524 aaKnown RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 ZNF652Q9Y2D9 606 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 ANKRD31Q8N7Z5 1873 aa7.13□□□□□ -1.27
COPS3-208ENST00000486032 COL11A2P13942 1736 aaPredicted RBP7.13□□□□□ -1.27
COPS3-208ENST00000486032 ADCY9O60503 1353 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 PTPRCP08575 1304 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 ERVV-1B6SEH8 477 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 IRX6P78412 446 aaPredicted RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 TCIRG1Q13488 830 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 NFIXQ14938 502 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 CWF19L2Q2TBE0 894 aaKnown RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 ATF7IPQ6VMQ6 1270 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 KIF13BQ9NQT8 1826 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 NRXN2Q9P2S2 1712 aa7.12□□□□□ -1.27
COPS3-208ENST00000486032 TNRC6CQ9HCJ0 1690 aaKnown RBP7.12□□□□□ -1.27
COPS3-208ENST00000486032 CACNA1FO60840 1977 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 PXDNLA1KZ92 1463 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 C10orf71Q711Q0 1435 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 MMP10P09238 476 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 VSIG8P0DPA2 414 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 TRIM27P14373 513 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 YBX3P16989 372 aaKnown RBP eCLIP7.11□□□□□ -1.271e-9■■□□□ 14.4
COPS3-208ENST00000486032 RRP1P56182 461 aaKnown RBP7.11□□□□□ -1.27
COPS3-208ENST00000486032 HSP90AB3PQ58FF7 597 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 DZIP1LQ8IYY4 767 aaKnown RBP7.11□□□□□ -1.27
COPS3-208ENST00000486032 NLGN1Q8N2Q7 840 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 PANK1Q8TE04 598 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 PSMG3-AS1Q96PY0 264 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms