RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
SSR4-210ENST00000485612 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
SSR4-210ENST00000485612 KIAA0100Q14667 2235 aaKnown RBP15.89■□□□□ 0.13
SSR4-210ENST00000485612 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
SSR4-210ENST00000485612 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
SSR4-210ENST00000485612 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
SSR4-210ENST00000485612 CRHR2Q13324 411 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 SLC9C1Q4G0N8 1177 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
SSR4-210ENST00000485612 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 ATP5J2-PTCD1G3V325 749 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
SSR4-210ENST00000485612 CAP1Q01518 475 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 RALBP1Q15311 655 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 MXD3Q9BW11 206 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
SSR4-210ENST00000485612 SASH1O94885 1247 aa15.86■□□□□ 0.13
SSR4-210ENST00000485612 MYCP01106 439 aaPredicted RBP15.86■□□□□ 0.13
SSR4-210ENST00000485612 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
SSR4-210ENST00000485612 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
SSR4-210ENST00000485612 DPF3Q92784 378 aa15.86■□□□□ 0.13
SSR4-210ENST00000485612 ARHGEF6Q15052 776 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 DACT2Q5SW24 774 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 PLBD2Q8NHP8 589 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 PTCH2Q9Y6C5 1203 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 MYH3P11055 1940 aa15.85■□□□□ 0.13
SSR4-210ENST00000485612 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
SSR4-210ENST00000485612 PSME4Q14997 1843 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 FBXW7Q969H0 707 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 CHPF2Q9P2E5 772 aa15.84■□□□□ 0.13
SSR4-210ENST00000485612 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
SSR4-210ENST00000485612 WTIPA6NIX2 430 aaPredicted RBP15.83■□□□□ 0.12
SSR4-210ENST00000485612 CHL1O00533 1208 aa15.83■□□□□ 0.12
SSR4-210ENST00000485612 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
SSR4-210ENST00000485612 MMP14P50281 582 aa15.83■□□□□ 0.12
SSR4-210ENST00000485612 PTPN18Q99952 460 aa15.83■□□□□ 0.12
SSR4-210ENST00000485612 XDHP47989 1333 aa15.83■□□□□ 0.12
SSR4-210ENST00000485612 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
SSR4-210ENST00000485612 A0A0C4DFX4 3053 aa15.82■□□□□ 0.12
SSR4-210ENST00000485612 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
SSR4-210ENST00000485612 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
SSR4-210ENST00000485612 COL6A3P12111 3177 aa15.82■□□□□ 0.12
SSR4-210ENST00000485612 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
SSR4-210ENST00000485612 UNCXA6NJT0 531 aa15.81■□□□□ 0.12
SSR4-210ENST00000485612 STRIP1Q5VSL9 837 aa15.81■□□□□ 0.12
SSR4-210ENST00000485612 HSP90B1P14625 803 aaKnown RBP15.8■□□□□ 0.12
SSR4-210ENST00000485612 GJA5P36382 358 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
SSR4-210ENST00000485612 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
SSR4-210ENST00000485612 PRO3102Q9H379 93 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
SSR4-210ENST00000485612 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
SSR4-210ENST00000485612 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
SSR4-210ENST00000485612 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
SSR4-210ENST00000485612 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
SSR4-210ENST00000485612 CCDC85AQ96PX6 553 aaPredicted RBP15.79■□□□□ 0.12
SSR4-210ENST00000485612 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
SSR4-210ENST00000485612 IREB2P48200 963 aaKnown RBP15.78■□□□□ 0.12
SSR4-210ENST00000485612 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
SSR4-210ENST00000485612 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SSR4-210ENST00000485612 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
SSR4-210ENST00000485612 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
SSR4-210ENST00000485612 COL1A1P02452 1464 aaPredicted RBP15.78■□□□□ 0.12
SSR4-210ENST00000485612 ZNF646O15015 1829 aaPredicted RBP15.78■□□□□ 0.12
SSR4-210ENST00000485612 RANBP2P49792 3224 aaKnown RBP15.77■□□□□ 0.12
SSR4-210ENST00000485612 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
SSR4-210ENST00000485612 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
SSR4-210ENST00000485612 PDE8AO60658 829 aa15.76■□□□□ 0.11
SSR4-210ENST00000485612 USP2O75604 605 aaPredicted RBP15.76■□□□□ 0.11
SSR4-210ENST00000485612 DLGAP5Q15398 846 aa15.76■□□□□ 0.11
SSR4-210ENST00000485612 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
SSR4-210ENST00000485612 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
SSR4-210ENST00000485612 HTATIP2Q9BUP3 242 aa15.76■□□□□ 0.11
SSR4-210ENST00000485612 NR2E3Q9Y5X4 410 aa15.76■□□□□ 0.11
SSR4-210ENST00000485612 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
SSR4-210ENST00000485612 DUSP27Q5VZP5 1158 aa15.75■□□□□ 0.11
SSR4-210ENST00000485612 SHISA4Q96DD7 197 aa15.75■□□□□ 0.11
SSR4-210ENST00000485612 MS4A4AQ96JQ5 239 aa15.75■□□□□ 0.11
SSR4-210ENST00000485612 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
SSR4-210ENST00000485612 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
SSR4-210ENST00000485612 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
SSR4-210ENST00000485612 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 HOXB7P09629 217 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 CCT4P50991 539 aaKnown RBP15.74■□□□□ 0.11
SSR4-210ENST00000485612 KIF22Q14807 665 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms