RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
DDX39B-221ENST00000484566 PPP1R42Q7Z4L9 355 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 H7C1D1 291 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
DDX39B-221ENST00000484566 NTSR2O95665 410 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-221ENST00000484566 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.63e-17■■■□□ 16.1
DDX39B-221ENST00000484566 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-221ENST00000484566 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 SLC51AQ86UW1 340 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 ABCC4O15439 1325 aa11.28□□□□□ -0.6
DDX39B-221ENST00000484566 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 TRPA1O75762 1119 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 RAD17O75943 681 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 MYL6BP14649 208 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 PTPREP23469 700 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
DDX39B-221ENST00000484566 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-221ENST00000484566 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 PRDM6Q9NQX0 595 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 RNF186Q9NXI6 227 aa11.27□□□□□ -0.61
DDX39B-221ENST00000484566 RRP7AQ9Y3A4 280 aaKnown RBP11.27□□□□□ -0.61
DDX39B-221ENST00000484566 NEFMP07197 916 aa11.26□□□□□ -0.61
DDX39B-221ENST00000484566 HIRAP54198 1017 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-221ENST00000484566 NBR1Q14596 966 aa11.26□□□□□ -0.61
DDX39B-221ENST00000484566 USP48Q86UV5 1035 aa11.26□□□□□ -0.61
DDX39B-221ENST00000484566 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
DDX39B-221ENST00000484566 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
DDX39B-221ENST00000484566 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-221ENST00000484566 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
DDX39B-221ENST00000484566 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
DDX39B-221ENST00000484566 BBOX1O75936 387 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 ZNF157P51786 506 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-221ENST00000484566 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
DDX39B-221ENST00000484566 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 UTP14AQ9BVJ6 771 aaKnown RBP11.25□□□□□ -0.61
DDX39B-221ENST00000484566 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 LAMB2P55268 1798 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 PAPPA2Q9BXP8 1791 aa11.25□□□□□ -0.61
DDX39B-221ENST00000484566 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
DDX39B-221ENST00000484566 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-221ENST00000484566 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
DDX39B-221ENST00000484566 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
DDX39B-221ENST00000484566 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
DDX39B-221ENST00000484566 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
DDX39B-221ENST00000484566 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
DDX39B-221ENST00000484566 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
DDX39B-221ENST00000484566 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
DDX39B-221ENST00000484566 DPF2Q92785 391 aa11.23□□□□□ -0.61
DDX39B-221ENST00000484566 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
DDX39B-221ENST00000484566 HTTP42858 3142 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 LRRC37AA6NMS7 1700 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-221ENST00000484566 SLC10A3P09131 477 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 EIF4A1P60842 406 aaKnown RBP11.22□□□□□ -0.61
DDX39B-221ENST00000484566 GRAPQ13588 217 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 TBC1D10BQ4KMP7 808 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-221ENST00000484566 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-221ENST00000484566 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
DDX39B-221ENST00000484566 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
DDX39B-221ENST00000484566 DUOX1Q9NRD9 1551 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 PSMD14O00487 310 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 SEMA3EO15041 775 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 MAP3K7O43318 606 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 RPS12P25398 132 aaKnown RBP11.21□□□□□ -0.61
DDX39B-221ENST00000484566 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 FBXO46Q6PJ61 603 aaPredicted RBP11.21□□□□□ -0.61
DDX39B-221ENST00000484566 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.61
DDX39B-221ENST00000484566 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 COL9A1P20849 921 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 WASHC4Q2M389 1173 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
DDX39B-221ENST00000484566 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 GGA3Q9NZ52 723 aa11.2□□□□□ -0.62
DDX39B-221ENST00000484566 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms