RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CTDSPL2Q05D32 466 aa11.71□□□□□ -0.53
COL8A1-207ENST00000483969 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.53
COL8A1-207ENST00000483969 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
COL8A1-207ENST00000483969 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
COL8A1-207ENST00000483969 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
COL8A1-207ENST00000483969 PKD1L3Q7Z443 1732 aa11.71□□□□□ -0.54
COL8A1-207ENST00000483969 NHSQ6T4R5 1651 aa11.71□□□□□ -0.54
COL8A1-207ENST00000483969 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
COL8A1-207ENST00000483969 RIPK4P57078 832 aa11.7□□□□□ -0.54
COL8A1-207ENST00000483969 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
COL8A1-207ENST00000483969 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
COL8A1-207ENST00000483969 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
COL8A1-207ENST00000483969 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
COL8A1-207ENST00000483969 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
COL8A1-207ENST00000483969 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
COL8A1-207ENST00000483969 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
COL8A1-207ENST00000483969 TMPOP42166 694 aaKnown RBP11.69□□□□□ -0.54
COL8A1-207ENST00000483969 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-207ENST00000483969 MCM10Q7L590 875 aa11.69□□□□□ -0.54
COL8A1-207ENST00000483969 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
COL8A1-207ENST00000483969 FLAD1Q8NFF5 587 aa11.69□□□□□ -0.54
COL8A1-207ENST00000483969 EP400Q96L91 3159 aa11.69□□□□□ -0.54
COL8A1-207ENST00000483969 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
COL8A1-207ENST00000483969 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
COL8A1-207ENST00000483969 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
COL8A1-207ENST00000483969 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
COL8A1-207ENST00000483969 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 ITPK1Q13572 414 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-207ENST00000483969 PPP2R2DQ66LE6 453 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 ZNF790Q6PG37 636 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL8A1-207ENST00000483969 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-207ENST00000483969 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
COL8A1-207ENST00000483969 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 PPFIA3O75145 1194 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 DHX9Q08211 1270 aaKnown RBP11.66□□□□□ -0.54
COL8A1-207ENST00000483969 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
COL8A1-207ENST00000483969 SBF2Q86WG5 1849 aa11.65□□□□□ -0.54
COL8A1-207ENST00000483969 APAF1O14727 1248 aa11.65□□□□□ -0.54
COL8A1-207ENST00000483969 STARD3NLO95772 234 aa11.65□□□□□ -0.54
COL8A1-207ENST00000483969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.65□□□□□ -0.54
COL8A1-207ENST00000483969 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
COL8A1-207ENST00000483969 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.54
COL8A1-207ENST00000483969 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
COL8A1-207ENST00000483969 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
COL8A1-207ENST00000483969 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 TTLL8A6PVC2 850 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 SSFA2P28290 1259 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
COL8A1-207ENST00000483969 Q6ZVU0 165 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-207ENST00000483969 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-207ENST00000483969 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
COL8A1-207ENST00000483969 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
COL8A1-207ENST00000483969 PTK2Q05397 1052 aa11.63□□□□□ -0.55
COL8A1-207ENST00000483969 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
COL8A1-207ENST00000483969 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-207ENST00000483969 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
COL8A1-207ENST00000483969 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-207ENST00000483969 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
COL8A1-207ENST00000483969 BTAF1O14981 1849 aa11.63□□□□□ -0.55
COL8A1-207ENST00000483969 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 KCNQ3O43525 872 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 NR6A1Q15406 480 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-207ENST00000483969 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
COL8A1-207ENST00000483969 POLD1P28340 1107 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 HEG1Q9ULI3 1381 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 MRC1P22897 1456 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 RREB1Q92766 1687 aa11.61□□□□□ -0.55
COL8A1-207ENST00000483969 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
COL8A1-207ENST00000483969 SPINT1O43278 529 aa11.6□□□□□ -0.55
COL8A1-207ENST00000483969 RFC4P35249 363 aa11.6□□□□□ -0.55
COL8A1-207ENST00000483969 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
COL8A1-207ENST00000483969 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
COL8A1-207ENST00000483969 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-207ENST00000483969 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms