RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
SND1-210ENST00000483503 CCDC129Q6ZRS4 1044 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 CCNL1Q9UK58 526 aaPredicted RBP14.2□□□□□ -0.14
SND1-210ENST00000483503 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
SND1-210ENST00000483503 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 MAST3O60307 1309 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 ARAP2Q8WZ64 1704 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
SND1-210ENST00000483503 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 SEC62Q99442 399 aaKnown RBP14.19□□□□□ -0.14
SND1-210ENST00000483503 ZDHHC9Q9Y397 364 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
SND1-210ENST00000483503 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
SND1-210ENST00000483503 HSPD1P10809 573 aaKnown RBP14.18□□□□□ -0.14
SND1-210ENST00000483503 CPA1P15085 419 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 PDCP20941 246 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 MCAMP43121 646 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 UBE3CQ15386 1083 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 KLHL40Q2TBA0 621 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 CCDC102BQ68D86 513 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
SND1-210ENST00000483503 CYP21A2P08686 494 aa14.17□□□□□ -0.14
SND1-210ENST00000483503 CCDC83Q8IWF9 413 aa14.17□□□□□ -0.14
SND1-210ENST00000483503 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
SND1-210ENST00000483503 MYH7P12883 1935 aa14.17□□□□□ -0.14
SND1-210ENST00000483503 M0R2C6 588 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 GNPATO15228 680 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 ADD2P35612 726 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 PKP1Q13835 747 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 SCARF1Q14162 830 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 IMMTQ16891 758 aaKnown RBP14.16□□□□□ -0.14
SND1-210ENST00000483503 ERFEQ4G0M1 354 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 DHX32Q7L7V1 743 aaKnown RBP14.16□□□□□ -0.14
SND1-210ENST00000483503 SEPT12Q8IYM1 358 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
SND1-210ENST00000483503 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
SND1-210ENST00000483503 GOLGA6L3A6NEY3 463 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 STX6O43752 255 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 MBD3O95983 291 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 ZSCAN22P10073 491 aaPredicted RBP14.15□□□□□ -0.14
SND1-210ENST00000483503 ADRA2BP18089 450 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 PHKA1P46020 1223 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 FGD1P98174 961 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 MAP3K12Q12852 859 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
SND1-210ENST00000483503 ME3Q16798 604 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 LMBRD1Q9NUN5 540 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
SND1-210ENST00000483503 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
SND1-210ENST00000483503 TPCN1Q9ULQ1 816 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 LY75O60449 1722 aa14.15□□□□□ -0.14
SND1-210ENST00000483503 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
SND1-210ENST00000483503 GJB2P29033 226 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 CHRNDQ07001 517 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 UBE4AQ14139 1066 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 CSPP1Q1MSJ5 1256 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 SLC9C2Q5TAH2 1124 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 TBC1D9BQ66K14 1250 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 NBPF5PQ86XG9 351 aaPredicted RBP14.14□□□□□ -0.15
SND1-210ENST00000483503 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
SND1-210ENST00000483503 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
SND1-210ENST00000483503 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 E7EWF7 191 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 GPAA1O43292 621 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 IDH1O75874 414 aaKnown RBP14.13□□□□□ -0.15
SND1-210ENST00000483503 LARGE1O95461 756 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 SYT1P21579 422 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 TRAPPC3LQ5T215 181 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 Q6ZUG5 572 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 FBXL16Q8N461 479 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 LLPHQ9BRT6 129 aaKnown RBP14.13□□□□□ -0.15
SND1-210ENST00000483503 GZF1Q9H116 711 aaPredicted RBP14.13□□□□□ -0.15
SND1-210ENST00000483503 QTRT2Q9H974 415 aaKnown RBP14.13□□□□□ -0.15
SND1-210ENST00000483503 BCL2L12Q9HB09 334 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 KIF3AQ9Y496 699 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
SND1-210ENST00000483503 COL24A1Q17RW2 1714 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
SND1-210ENST00000483503 CHGBP05060 677 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 PDE6AP16499 860 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 RFC4P35249 363 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 BICDL1Q6ZP65 573 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 PTF1AQ7RTS3 328 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
SND1-210ENST00000483503 ANKRD2Q9GZV1 360 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 PIH1D3Q9NQM4 214 aaKnown RBP14.12□□□□□ -0.15
SND1-210ENST00000483503 RGS17Q9UGC6 210 aaPredicted RBP14.12□□□□□ -0.15
SND1-210ENST00000483503 TAF6LQ9Y6J9 622 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 TAF1LQ8IZX4 1826 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 ZMYM6O95789 1325 aa14.12□□□□□ -0.15
SND1-210ENST00000483503 WDR19Q8NEZ3 1342 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms