RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
EWSR1-217ENST00000483415 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
EWSR1-217ENST00000483415 BBOX1O75936 387 aa12.99□□□□□ -0.33
EWSR1-217ENST00000483415 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
EWSR1-217ENST00000483415 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
EWSR1-217ENST00000483415 ITGA6P23229 1130 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 GRAPQ13588 217 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
EWSR1-217ENST00000483415 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 VPS33BQ9H267 617 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 NPR1P16066 1061 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 KCNQ4P56696 695 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 BMP2KLQ5H9B9 411 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
EWSR1-217ENST00000483415 PHF14O94880 888 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
EWSR1-217ENST00000483415 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
EWSR1-217ENST00000483415 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
EWSR1-217ENST00000483415 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
EWSR1-217ENST00000483415 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
EWSR1-217ENST00000483415 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
EWSR1-217ENST00000483415 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.33
EWSR1-217ENST00000483415 TGFB2P61812 414 aa12.97□□□□□ -0.33
EWSR1-217ENST00000483415 FGFR2P21802 821 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 SASH1O94885 1247 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 GREM2Q9H772 168 aa12.96□□□□□ -0.33
EWSR1-217ENST00000483415 COL4A1P02462 1669 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 ERC2O15083 957 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 UBE4AQ14139 1066 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.34
EWSR1-217ENST00000483415 MASTLQ96GX5 879 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.34
EWSR1-217ENST00000483415 KIF2CQ99661 725 aa12.96□□□□□ -0.34
EWSR1-217ENST00000483415 DICER1Q9UPY3 1922 aaKnown RBP12.95□□□□□ -0.34
EWSR1-217ENST00000483415 SEMA3EO15041 775 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
EWSR1-217ENST00000483415 TAF1P21675 1872 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 CBX1P83916 185 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 LEMD3Q9Y2U8 911 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
EWSR1-217ENST00000483415 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 MMP10P09238 476 aa12.94□□□□□ -0.34
EWSR1-217ENST00000483415 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
EWSR1-217ENST00000483415 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
EWSR1-217ENST00000483415 PDE8BO95263 885 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
EWSR1-217ENST00000483415 BAG4O95429 457 aaKnown RBP12.93□□□□□ -0.34
EWSR1-217ENST00000483415 SRGNP10124 158 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 ATP5JP18859 108 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 LPIN2Q92539 896 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 MX1P20591 662 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 POLD1P28340 1107 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
EWSR1-217ENST00000483415 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
EWSR1-217ENST00000483415 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
EWSR1-217ENST00000483415 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 ZNF804BA4D1E1 1349 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 PDE1AP54750 535 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 TAF3Q5VWG9 929 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
EWSR1-217ENST00000483415 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
EWSR1-217ENST00000483415 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
EWSR1-217ENST00000483415 CCDC39Q9UFE4 941 aa12.92□□□□□ -0.34
EWSR1-217ENST00000483415 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
EWSR1-217ENST00000483415 ATP2B4P23634 1241 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 HIP1O00291 1037 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 SLC5A1P13866 664 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 TSC1Q92574 1164 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 XDHP47989 1333 aa12.91□□□□□ -0.34
EWSR1-217ENST00000483415 OS9Q13438 667 aaPredicted RBP12.9□□□□□ -0.34
EWSR1-217ENST00000483415 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
EWSR1-217ENST00000483415 MMP14P50281 582 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms