RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 IFFO2Q5TF58 517 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 ZSCAN25Q6NSZ9 544 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
CCDC78-213ENST00000482878 TEX2Q8IWB9 1127 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 STOX1Q6ZVD7 989 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
CCDC78-213ENST00000482878 TTC5Q8N0Z6 440 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 FTOQ9C0B1 505 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC78-213ENST00000482878 FOSBP53539 338 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 BMS1Q14692 1282 aaKnown RBP14.49□□□□□ -0.09
CCDC78-213ENST00000482878 CCDC144BQ3MJ40 725 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 CCDC144CPQ8IYA2 1237 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 RASSF4Q9H2L5 321 aa14.49□□□□□ -0.09
CCDC78-213ENST00000482878 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
CCDC78-213ENST00000482878 ADD1P35611 737 aaKnown RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
CCDC78-213ENST00000482878 ANKRD13DQ6ZTN6 518 aa14.48□□□□□ -0.09
CCDC78-213ENST00000482878 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 MCMDC2Q4G0Z9 681 aa14.48□□□□□ -0.09
CCDC78-213ENST00000482878 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
CCDC78-213ENST00000482878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 ZSCAN16Q9H4T2 348 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
CCDC78-213ENST00000482878 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
CCDC78-213ENST00000482878 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 GTF2A1P52655 376 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-213ENST00000482878 LRP10Q7Z4F1 713 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 SLC52A2Q9HAB3 445 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 USP16Q9Y5T5 823 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 SMARCC2Q8TAQ2 1214 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 APPP05067 770 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 IQCB1Q15051 598 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 C11orf57Q6ZUT1 292 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-213ENST00000482878 HAUS7Q99871 368 aa14.47□□□□□ -0.09
CCDC78-213ENST00000482878 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 CTDNEP1O95476 244 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 CYP2C19P33261 490 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 EVA1CP58658 441 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 KRBA2Q6ZNG9 492 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
CCDC78-213ENST00000482878 A0A087WWV3 80 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 GOLPH3LQ9H4A5 285 aa14.46□□□□□ -0.09
CCDC78-213ENST00000482878 KDM6AO15550 1401 aaPredicted RBP14.46□□□□□ -0.1
CCDC78-213ENST00000482878 PFKFB2O60825 505 aa14.46□□□□□ -0.1
CCDC78-213ENST00000482878 RABL6Q3YEC7 729 aaPredicted RBP14.46□□□□□ -0.1
CCDC78-213ENST00000482878 GORABQ5T7V8 394 aa14.46□□□□□ -0.1
CCDC78-213ENST00000482878 TOMM22Q9NS69 142 aa14.46□□□□□ -0.1
CCDC78-213ENST00000482878 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 TOM1L2Q6ZVM7 507 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 CCAR1Q8IX12 1150 aaKnown RBP14.45□□□□□ -0.1
CCDC78-213ENST00000482878 ERO1AQ96HE7 468 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 ARID5BQ14865 1188 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 ERBB3P21860 1342 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 SLU7O95391 586 aaKnown RBP14.45□□□□□ -0.1
CCDC78-213ENST00000482878 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
CCDC78-213ENST00000482878 FILIP1Q7Z7B0 1213 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 KBTBD3Q8NAB2 608 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 RCOR1Q9UKL0 485 aa14.45□□□□□ -0.1
CCDC78-213ENST00000482878 SLIT3O75094 1523 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 A0A087WZG4 1122 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 PTPDC1A2A3K4 754 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
CCDC78-213ENST00000482878 SYT10Q6XYQ8 523 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 DHX32Q7L7V1 743 aaKnown RBP14.44□□□□□ -0.1
CCDC78-213ENST00000482878 USP28Q96RU2 1077 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 LLPHQ9BRT6 129 aaKnown RBP14.44□□□□□ -0.1
CCDC78-213ENST00000482878 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 RFX7Q2KHR2 1363 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 CCDC191Q8NCU4 936 aa14.44□□□□□ -0.1
CCDC78-213ENST00000482878 NCOA5Q9HCD5 579 aaKnown RBP14.44□□□□□ -0.1
CCDC78-213ENST00000482878 SIPA1L3O60292 1781 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-213ENST00000482878 USP27XA6NNY8 438 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 GOLGA6L19H0YKK7 550 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 PHKG2P15735 406 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 ERCC6LQ2NKX8 1250 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-213ENST00000482878 CAVIN2O95810 425 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 TATP17735 454 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-213ENST00000482878 CDC25BP30305 580 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 FER1L4A9Z1Z3 1794 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 GOLIM4O00461 696 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 TRIM66O15016 1216 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 GUCY1B3Q02153 619 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 GPS2Q13227 327 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 CREBRFQ8IUR6 639 aa14.43□□□□□ -0.1
CCDC78-213ENST00000482878 TPM4P67936 248 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 SARM1Q6SZW1 724 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 LMBR1LQ6UX01 489 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 ERCC4Q92889 916 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-213ENST00000482878 NEUROD6Q96NK8 337 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 EFCC1Q9HA90 598 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
CCDC78-213ENST00000482878 C5P01031 1676 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms