RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 NPHP1O15259 732 aa14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 GREM2Q9H772 168 aa14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 GPHNQ9NQX3 736 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 AKAP2Q9Y2D5 859 aa14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 R3HCC1Q9Y3T6 440 aaKnown RBP14.13□□□□□ -0.15
RAPGEF3-210ENST00000482843 SLIT3O75094 1523 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 ST3GAL1Q11201 340 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 SCARF1Q14162 830 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 OTUD7BQ6GQQ9 843 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 TTC6Q86TZ1 520 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 ATG3Q9NT62 314 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
RAPGEF3-210ENST00000482843 KCNQ4P56696 695 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 SF3A1Q15459 793 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 SLC9C2Q5TAH2 1124 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 MPHOSPH8Q99549 860 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 TNMDQ9H2S6 317 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 RXRAP19793 462 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 CASP7P55210 303 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 TRDNQ13061 729 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 GNL2Q13823 731 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 OSBP2Q969R2 916 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 NUP62CLQ9H1M0 184 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 LRRFIP1Q32MZ4 808 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 DHX32Q7L7V1 743 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 ZNF609O15014 1411 aa14.11□□□□□ -0.15
RAPGEF3-210ENST00000482843 LIG1P18858 919 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 IMMTQ16891 758 aaKnown RBP14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 STOX1Q6ZVD7 989 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 M0R2C6 588 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 FTOQ9C0B1 505 aaKnown RBP eCLIP14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 MAST3O60307 1309 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 OVOS2A0A0G2JMS6 1433 aa14.1□□□□□ -0.15
RAPGEF3-210ENST00000482843 E7EWF7 191 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 ADCY5O95622 1261 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 POLR3DP05423 398 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 ME1P48163 572 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 TEX13AQ9BXU3 409 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 PTPDC1A2A3K4 754 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 SCRN1Q12765 414 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 ZNF213O14771 459 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 PPP1R9BQ96SB3 815 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
RAPGEF3-210ENST00000482843 CCDC192P0DO97 292 aa14.08□□□□□ -0.15
RAPGEF3-210ENST00000482843 ZRSR1Q15695 479 aaKnown RBP14.08□□□□□ -0.15
RAPGEF3-210ENST00000482843 GTF3C6Q969F1 213 aa14.08□□□□□ -0.15
RAPGEF3-210ENST00000482843 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.15
RAPGEF3-210ENST00000482843 GOLGA8BA8MQT2 603 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 MAP3K11Q16584 847 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 SCAND2PQ9GZW5 306 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 MED23Q9ULK4 1368 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 KLF18A0A0U1RQI7 1052 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 SASS6Q6UVJ0 657 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 HELLSQ9NRZ9 838 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 ABCF2Q9UG63 623 aa14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-210ENST00000482843 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 SH3BP1Q9Y3L3 701 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 COL15A1P39059 1388 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 ZMYM1Q5SVZ6 1142 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 AXDND1Q5T1B0 1012 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 ERCC4Q92889 916 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 AIDAQ96BJ3 306 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
RAPGEF3-210ENST00000482843 GPAA1O43292 621 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 CPDO75976 1380 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 LETM1O95202 739 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 FGAP02671 866 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 DDB1Q16531 1140 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 MAP3K15Q6ZN16 1313 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 SMIM5Q71RC9 77 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 C17orf53Q8N3J3 647 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 ADAMTSL3P82987 1691 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 PRC1O43663 620 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 PCCAP05165 728 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms