RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 COG3Q96JB2 828 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 LRP5O75197 1615 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
LIMK2-209ENST00000482270 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-209ENST00000482270 CAMKK2Q96RR4 588 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 TNS2Q63HR2 1409 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
LIMK2-209ENST00000482270 BTAF1O14981 1849 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 IL2RAP01589 272 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 CLN3Q13286 438 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 R3HDM1Q15032 1099 aaKnown RBP12.34□□□□□ -0.43
LIMK2-209ENST00000482270 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 MAP3K19Q56UN5 1328 aa12.34□□□□□ -0.43
LIMK2-209ENST00000482270 ATP9BO43861 1147 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 GNRH1P01148 92 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 PTSQ03393 145 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 ETNK1Q9HBU6 452 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 TFIP11Q9UBB9 837 aaKnown RBP12.33□□□□□ -0.44
LIMK2-209ENST00000482270 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
LIMK2-209ENST00000482270 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
LIMK2-209ENST00000482270 TERTO14746 1132 aaKnown RBP12.32□□□□□ -0.44
LIMK2-209ENST00000482270 FYB1O15117 783 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 GTF2IP78347 998 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
LIMK2-209ENST00000482270 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 IP6K1Q92551 441 aa12.32□□□□□ -0.44
LIMK2-209ENST00000482270 EXOC5O00471 708 aa12.31□□□□□ -0.44
LIMK2-209ENST00000482270 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
LIMK2-209ENST00000482270 HOXC9P31274 260 aa12.31□□□□□ -0.44
LIMK2-209ENST00000482270 AMPHP49418 695 aa12.31□□□□□ -0.44
LIMK2-209ENST00000482270 SERTAD1Q9UHV2 236 aa12.31□□□□□ -0.44
LIMK2-209ENST00000482270 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
LIMK2-209ENST00000482270 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-209ENST00000482270 IL2RBP14784 551 aa12.3□□□□□ -0.44
LIMK2-209ENST00000482270 GDF10P55107 478 aa12.3□□□□□ -0.44
LIMK2-209ENST00000482270 RNF144AP50876 292 aaPredicted RBP12.29□□□□□ -0.44
LIMK2-209ENST00000482270 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
LIMK2-209ENST00000482270 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
LIMK2-209ENST00000482270 KCNQ2O43526 872 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 WFS1O76024 890 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 SCNN1DP51172 638 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 POU4F2Q12837 409 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 TLR1Q15399 786 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
LIMK2-209ENST00000482270 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
LIMK2-209ENST00000482270 MEGF6O75095 1541 aa12.27□□□□□ -0.44
LIMK2-209ENST00000482270 CENPCQ03188 943 aa12.27□□□□□ -0.45
LIMK2-209ENST00000482270 NFX1Q12986 1120 aaKnown RBP12.27□□□□□ -0.45
LIMK2-209ENST00000482270 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.45
LIMK2-209ENST00000482270 MKRN1Q9UHC7 482 aaKnown RBP12.27□□□□□ -0.45
LIMK2-209ENST00000482270 PCDHGA11Q9Y5H2 935 aa12.27□□□□□ -0.45
LIMK2-209ENST00000482270 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
LIMK2-209ENST00000482270 BCL9O00512 1426 aa12.27□□□□□ -0.45
LIMK2-209ENST00000482270 RFX1P22670 979 aa12.26□□□□□ -0.45
LIMK2-209ENST00000482270 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
LIMK2-209ENST00000482270 PHKA2P46019 1235 aa12.26□□□□□ -0.45
LIMK2-209ENST00000482270 CCDC155Q8N6L0 562 aa12.26□□□□□ -0.45
LIMK2-209ENST00000482270 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
LIMK2-209ENST00000482270 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
LIMK2-209ENST00000482270 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
LIMK2-209ENST00000482270 PPFIA3O75145 1194 aa12.25□□□□□ -0.45
LIMK2-209ENST00000482270 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
LIMK2-209ENST00000482270 TMEM214Q6NUQ4 689 aaKnown RBP12.25□□□□□ -0.45
LIMK2-209ENST00000482270 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
LIMK2-209ENST00000482270 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
LIMK2-209ENST00000482270 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
LIMK2-209ENST00000482270 TUBGCP6Q96RT7 1819 aa12.25□□□□□ -0.45
LIMK2-209ENST00000482270 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
LIMK2-209ENST00000482270 INHAP05111 366 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 ITGB4P16144 1822 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 GPC1P35052 558 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 FLT4P35916 1363 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
LIMK2-209ENST00000482270 SLC16A10Q8TF71 515 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
LIMK2-209ENST00000482270 LY75O60449 1722 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 TOGARAM1Q9Y4F4 1720 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 INSRP06213 1382 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
LIMK2-209ENST00000482270 H3BM21 787 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms