RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ZNF274Q96GC6 653 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-218ENST00000482056 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 CTNNA3Q9UI47 895 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 AKAP2Q9Y2D5 859 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 A1BGP04217 495 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 CHAF1AQ13111 956 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-218ENST00000482056 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 GORABQ5T7V8 394 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
C9orf3-218ENST00000482056 KIAA1524Q8TCG1 905 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 MAST3O60307 1309 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 ZFYP08048 801 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-218ENST00000482056 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-218ENST00000482056 CCDC57Q2TAC2 916 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 PRDM11Q9NQV5 511 aa18.04■□□□□ 0.48
C9orf3-218ENST00000482056 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-218ENST00000482056 ZNF165P49910 485 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 LRRC24Q50LG9 513 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 DRC7Q8IY82 874 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 RCOR1Q9UKL0 485 aa18.03■□□□□ 0.48
C9orf3-218ENST00000482056 TRIM5Q9C035 493 aa18.02■□□□□ 0.48
C9orf3-218ENST00000482056 FBXL16Q8N461 479 aa18.02■□□□□ 0.47
C9orf3-218ENST00000482056 ZNF594Q96JF6 807 aaPredicted RBP18.02■□□□□ 0.47
C9orf3-218ENST00000482056 KCNF1Q9H3M0 494 aa18.02■□□□□ 0.47
C9orf3-218ENST00000482056 CTDNEP1O95476 244 aa18.01■□□□□ 0.47
C9orf3-218ENST00000482056 CCT2P78371 535 aaKnown RBP18.01■□□□□ 0.47
C9orf3-218ENST00000482056 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
C9orf3-218ENST00000482056 IL2RBP14784 551 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.47
C9orf3-218ENST00000482056 ZNF75DP51815 510 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 IMMTQ16891 758 aaKnown RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 C17orf53Q8N3J3 647 aaPredicted RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 ISCA1Q9BUE6 129 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 DHX16O60231 1041 aaKnown RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
C9orf3-218ENST00000482056 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
C9orf3-218ENST00000482056 STX1AQ16623 288 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 TNS2Q63HR2 1409 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 PLA2G4DQ86XP0 818 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
C9orf3-218ENST00000482056 M0R2C6 588 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
C9orf3-218ENST00000482056 PTGS1P23219 599 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
C9orf3-218ENST00000482056 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 WASHC4Q2M389 1173 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 PYCARDQ9ULZ3 195 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 CDC25BP30305 580 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 FOSBP53539 338 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 SLFNL1Q499Z3 407 aa17.99■□□□□ 0.47
C9orf3-218ENST00000482056 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-218ENST00000482056 PUS3Q9BZE2 481 aaKnown RBP17.99■□□□□ 0.47
C9orf3-218ENST00000482056 COL5A2P05997 1499 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-218ENST00000482056 EVCP57679 992 aa17.98■□□□□ 0.47
C9orf3-218ENST00000482056 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
C9orf3-218ENST00000482056 CARD10Q9BWT7 1032 aa17.98■□□□□ 0.47
C9orf3-218ENST00000482056 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
C9orf3-218ENST00000482056 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-218ENST00000482056 FAM160A1Q05DH4 1040 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 OSBP2Q969R2 916 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
C9orf3-218ENST00000482056 ME1P48163 572 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 PLA2G12BQ9BX93 195 aa17.97■□□□□ 0.47
C9orf3-218ENST00000482056 IFIT5Q13325 482 aaKnown RBP17.96■□□□□ 0.47
C9orf3-218ENST00000482056 SARM1Q6SZW1 724 aa17.96■□□□□ 0.47
C9orf3-218ENST00000482056 APPBP2Q92624 585 aa17.96■□□□□ 0.47
C9orf3-218ENST00000482056 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
C9orf3-218ENST00000482056 ANO10Q9NW15 660 aa17.96■□□□□ 0.47
C9orf3-218ENST00000482056 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
C9orf3-218ENST00000482056 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
C9orf3-218ENST00000482056 MYH7P12883 1935 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 ZSCAN25Q6NSZ9 544 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
C9orf3-218ENST00000482056 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 BECN2A8MW95 431 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 NCOA7Q8NI08 942 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 NAT10Q9H0A0 1025 aaKnown RBP17.95■□□□□ 0.46
C9orf3-218ENST00000482056 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-218ENST00000482056 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
C9orf3-218ENST00000482056 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
C9orf3-218ENST00000482056 PRC1O43663 620 aa17.94■□□□□ 0.46
C9orf3-218ENST00000482056 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-218ENST00000482056 MRPS27Q92552 414 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms