RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 EAPPQ56P03 285 aaPredicted RBP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 GIGYF2Q6Y7W6 1299 aaKnown RBP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
HLA-B-253ENST00000481849 MCOLN1Q9GZU1 580 aa11.77□□□□□ -0.53
HLA-B-253ENST00000481849 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
HLA-B-253ENST00000481849 IQCA1LA6NCM1 817 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 NTSR2O95665 410 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
HLA-B-253ENST00000481849 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
HLA-B-253ENST00000481849 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 RUNDC1Q96C34 613 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
HLA-B-253ENST00000481849 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
HLA-B-253ENST00000481849 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
HLA-B-253ENST00000481849 GJA3Q9Y6H8 435 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
HLA-B-253ENST00000481849 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 HOXA10P31260 410 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-253ENST00000481849 SOX10P56693 466 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 JDP2Q8WYK2 163 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 PSMD1Q99460 953 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-253ENST00000481849 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-253ENST00000481849 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
HLA-B-253ENST00000481849 FZD9O00144 591 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 EPHX2P34913 555 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
HLA-B-253ENST00000481849 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 CHL1O00533 1208 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-253ENST00000481849 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-253ENST00000481849 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
HLA-B-253ENST00000481849 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
HLA-B-253ENST00000481849 TRIOBPQ9H2D6 2365 aa11.72□□□□□ -0.53
HLA-B-253ENST00000481849 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 ABCC4O15439 1325 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 VEGFBP49765 207 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-253ENST00000481849 NLRP10Q86W26 655 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 GPC2Q8N158 579 aa11.71□□□□□ -0.53
HLA-B-253ENST00000481849 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
HLA-B-253ENST00000481849 ARFGEF2Q9Y6D5 1785 aa11.71□□□□□ -0.54
HLA-B-253ENST00000481849 RIC1Q4ADV7 1423 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 TCIRG1Q13488 830 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 AOC3Q16853 763 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 NIM1KQ8IY84 436 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 MTRQ99707 1265 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.54
HLA-B-253ENST00000481849 COL4A5P29400 1685 aa11.7□□□□□ -0.54
HLA-B-253ENST00000481849 PASKQ96RG2 1323 aa11.69□□□□□ -0.54
HLA-B-253ENST00000481849 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-253ENST00000481849 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-253ENST00000481849 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
HLA-B-253ENST00000481849 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-253ENST00000481849 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
HLA-B-253ENST00000481849 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
HLA-B-253ENST00000481849 SH3TC1Q8TE82 1336 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 EPS15P42566 896 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 DUSP27Q5VZP5 1158 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-253ENST00000481849 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
HLA-B-253ENST00000481849 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-253ENST00000481849 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
HLA-B-253ENST00000481849 MKI67P46013 3256 aaKnown RBP11.68□□□□□ -0.54
HLA-B-253ENST00000481849 ELL2O00472 640 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-253ENST00000481849 APAF1O14727 1248 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 SCNN1DP51172 638 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 FAM89AQ96GI7 184 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms