RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 CTBSQ01459 385 aa11.65□□□□□ -0.54
PDCD4-206ENST00000481353 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
PDCD4-206ENST00000481353 GLIS3Q8NEA6 775 aa11.65□□□□□ -0.54
PDCD4-206ENST00000481353 TRAK1Q9UPV9 953 aa11.65□□□□□ -0.54
PDCD4-206ENST00000481353 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 EDN3P14138 238 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 SPATA32Q96LK8 384 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
PDCD4-206ENST00000481353 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
PDCD4-206ENST00000481353 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 PUS7Q96PZ0 661 aaKnown RBP11.63□□□□□ -0.55
PDCD4-206ENST00000481353 PPP4R2Q9NY27 417 aa11.63□□□□□ -0.55
PDCD4-206ENST00000481353 A0A1W2PP55 124 aa11.62□□□□□ -0.55
PDCD4-206ENST00000481353 EFSO43281 561 aa11.62□□□□□ -0.55
PDCD4-206ENST00000481353 GRIN2CQ14957 1233 aa11.62□□□□□ -0.55
PDCD4-206ENST00000481353 PEAR1Q5VY43 1037 aaPredicted RBP11.62□□□□□ -0.55
PDCD4-206ENST00000481353 FIGNL1Q6PIW4 674 aa11.62□□□□□ -0.55
PDCD4-206ENST00000481353 OR13H1Q8NG92 308 aa11.62□□□□□ -0.55
PDCD4-206ENST00000481353 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
PDCD4-206ENST00000481353 DNAJC2Q99543 621 aaKnown RBP11.62□□□□□ -0.55
PDCD4-206ENST00000481353 DHX57Q6P158 1386 aaKnown RBP11.62□□□□□ -0.55
PDCD4-206ENST00000481353 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 DCDC2BA2VCK2 349 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
PDCD4-206ENST00000481353 GTF2F1P35269 517 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDCD4-206ENST00000481353 RBL2Q08999 1139 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 CCINQ13939 588 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 GSX2Q9BZM3 304 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 EHD4Q9H223 541 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 STRN4Q9NRL3 753 aa11.61□□□□□ -0.55
PDCD4-206ENST00000481353 CUX2O14529 1486 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 SMARCA5O60264 1052 aaPredicted RBP11.6□□□□□ -0.55
PDCD4-206ENST00000481353 SASH3O75995 380 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 RSRP1Q9BUV0 290 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
PDCD4-206ENST00000481353 PHF20L1A8MW92 1017 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 SHISA8B8ZZ34 492 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 MMP20O60882 483 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
PDCD4-206ENST00000481353 FGRP09769 529 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 XRCC5P13010 732 aaKnown RBP11.59□□□□□ -0.55
PDCD4-206ENST00000481353 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 COPRSQ9NQ92 184 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 LATS2Q9NRM7 1088 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
PDCD4-206ENST00000481353 TTF2Q9UNY4 1162 aaKnown RBP11.59□□□□□ -0.55
PDCD4-206ENST00000481353 ATXN7O15265 892 aaPredicted RBP11.58□□□□□ -0.56
PDCD4-206ENST00000481353 FGFR3P22607 806 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
PDCD4-206ENST00000481353 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
PDCD4-206ENST00000481353 PAK2Q13177 524 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 PWP1Q13610 501 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 LAMC2Q13753 1193 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 MCF2L2Q86YR7 1114 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 RASGRP4Q8TDF6 673 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 GPRASP2Q96D09 838 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 KBTBD4Q9NVX7 518 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 PCDHGC4Q9Y5F7 938 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
PDCD4-206ENST00000481353 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
PDCD4-206ENST00000481353 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
PDCD4-206ENST00000481353 BCRP11274 1271 aa11.57□□□□□ -0.56
PDCD4-206ENST00000481353 ATF4P18848 351 aaPredicted RBP11.57□□□□□ -0.56
PDCD4-206ENST00000481353 CD33P20138 364 aa11.57□□□□□ -0.56
PDCD4-206ENST00000481353 SOX18P35713 384 aa11.57□□□□□ -0.56
PDCD4-206ENST00000481353 NOP9Q86U38 636 aaKnown RBP11.57□□□□□ -0.56
PDCD4-206ENST00000481353 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
PDCD4-206ENST00000481353 KIF4AO95239 1232 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 RARAP10276 462 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 TNP2Q05952 138 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
PDCD4-206ENST00000481353 OXCT2Q9BYC2 517 aaPredicted RBP11.56□□□□□ -0.56
PDCD4-206ENST00000481353 ABCB6Q9NP58 842 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
PDCD4-206ENST00000481353 KLF15Q9UIH9 416 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 CNTNAP5Q8WYK1 1306 aa11.56□□□□□ -0.56
PDCD4-206ENST00000481353 MAPTP10636 758 aaKnown RBP11.55□□□□□ -0.56
PDCD4-206ENST00000481353 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
PDCD4-206ENST00000481353 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
PDCD4-206ENST00000481353 FCGRTP55899 365 aa11.55□□□□□ -0.56
PDCD4-206ENST00000481353 MAP3K10Q02779 954 aa11.55□□□□□ -0.56
PDCD4-206ENST00000481353 KRT25Q7Z3Z0 450 aa11.55□□□□□ -0.56
PDCD4-206ENST00000481353 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
PDCD4-206ENST00000481353 RLBP1P12271 317 aa11.54□□□□□ -0.56
PDCD4-206ENST00000481353 CCDC85BQ15834 202 aaPredicted RBP11.54□□□□□ -0.56
PDCD4-206ENST00000481353 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
PDCD4-206ENST00000481353 TCF12Q99081 682 aa11.54□□□□□ -0.56
PDCD4-206ENST00000481353 LIN7BQ9HAP6 207 aa11.54□□□□□ -0.56
PDCD4-206ENST00000481353 ZFYVE1Q9HBF4 777 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms