RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 TXNRD3Q86VQ6 643 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 CNNM1Q9NRU3 951 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 CNTNAP1P78357 1384 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 USP17L3A6NCW0 530 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 USP17L4A6NCW7 530 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 PLIN1O60240 522 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 VIL1P09327 827 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 CHRNDQ07001 517 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 GRM1Q13255 1194 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 DEFB115Q30KQ5 88 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 USP17L1Q7RTZ2 530 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 GLIS2Q9BZE0 524 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 TNNQ9UQP3 1299 aa11.48□□□□□ -0.57
SRGAP3-206ENST00000480750 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 CELF2O95319 508 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 LDHAL6AQ6ZMR3 332 aa11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 PUS3Q9BZE2 481 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 COA1Q9GZY4 146 aa11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 NOB1Q9ULX3 412 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
SRGAP3-206ENST00000480750 ASTN2O75129 1339 aaPredicted RBP11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 VEGFBP49765 207 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 USP48Q86UV5 1035 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 AIDAQ96BJ3 306 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 PGAP2Q9UHJ9 254 aa11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-206ENST00000480750 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 ECM29Q5VYK3 1845 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 RASSF10A6NK89 507 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 ECE1P42892 770 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 KRT26Q7Z3Y9 468 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 ZNF804AQ7Z570 1209 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 KLHDC4Q8TBB5 520 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 MYOZ2Q9NPC6 264 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 JAG2Q9Y219 1238 aa11.45□□□□□ -0.58
SRGAP3-206ENST00000480750 ZNF609O15014 1411 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 ANKRD44Q8N8A2 993 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 GGA3Q9NZ52 723 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
SRGAP3-206ENST00000480750 UTYO14607 1347 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 BCAR3O75815 825 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 ZNF280AP59817 542 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 GTF2IP78347 998 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 SCARF1Q14162 830 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 DACT2Q5SW24 774 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 CST9Q5W186 159 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 API5Q9BZZ5 524 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 USP44Q9H0E7 712 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
SRGAP3-206ENST00000480750 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 LRRC24Q50LG9 513 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 CYP4F22Q6NT55 531 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 C2orf69Q8N8R5 385 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 CD209Q9NNX6 404 aa11.42□□□□□ -0.58
SRGAP3-206ENST00000480750 ARAP2Q8WZ64 1704 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 HUNKP57058 714 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 METTL24Q5JXM2 366 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 SAPCD2Q86UD0 394 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 VPS37DQ86XT2 251 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 KIAA0825Q8IV33 1275 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 GMLQ99445 158 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 HDAC5Q9UQL6 1122 aa11.41□□□□□ -0.58
SRGAP3-206ENST00000480750 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 MMP14P50281 582 aa11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
SRGAP3-206ENST00000480750 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms