RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 MASTLQ96GX5 879 aa9.53□□□□□ -0.88
SSR1-206ENST00000479365 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
SSR1-206ENST00000479365 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
SSR1-206ENST00000479365 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
SSR1-206ENST00000479365 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
SSR1-206ENST00000479365 CHL1O00533 1208 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 CD46P15529 392 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 EIF2S2P20042 333 aaKnown RBP9.52□□□□□ -0.89
SSR1-206ENST00000479365 GPTP24298 496 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 SLC4A3P48751 1232 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 WDR43Q15061 677 aaKnown RBP eCLIP9.52□□□□□ -0.89
SSR1-206ENST00000479365 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 TIAM2Q8IVF5 1701 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 CNKSR1Q969H4 720 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
SSR1-206ENST00000479365 BABAM1Q9NWV8 329 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 KDM2BQ8NHM5 1336 aa9.52□□□□□ -0.89
SSR1-206ENST00000479365 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
SSR1-206ENST00000479365 ARFGEF2Q9Y6D5 1785 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 CFHP08603 1231 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 NPR1P16066 1061 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 LMOD3Q0VAK6 560 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 SUSD4Q5VX71 490 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 KIF6Q6ZMV9 814 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 SLC51AQ86UW1 340 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 LTBP3Q9NS15 1303 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
SSR1-206ENST00000479365 SNED1Q8TER0 1413 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 POTECB2RU33 542 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 RAD21O60216 631 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 NTSR2O95665 410 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 CRY2Q49AN0 593 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 TAOK3Q9H2K8 898 aa9.5□□□□□ -0.89
SSR1-206ENST00000479365 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
SSR1-206ENST00000479365 NUP98P52948 1817 aa9.49□□□□□ -0.89
SSR1-206ENST00000479365 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
SSR1-206ENST00000479365 APLP1P51693 650 aa9.49□□□□□ -0.89
SSR1-206ENST00000479365 XAGE3Q8WTP9 111 aa9.49□□□□□ -0.89
SSR1-206ENST00000479365 BEGAINQ9BUH8 593 aa9.49□□□□□ -0.89
SSR1-206ENST00000479365 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
SSR1-206ENST00000479365 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 APAF1O14727 1248 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 ZNF853P0CG23 659 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
SSR1-206ENST00000479365 HTRA3P83110 453 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 CCDC93Q567U6 631 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 SOGA3Q5TF21 947 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 COPS6Q7L5N1 327 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
SSR1-206ENST00000479365 NYXQ9GZU5 481 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 PLSCR2Q9NRY7 297 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 MBIPQ9NS73 344 aa9.48□□□□□ -0.89
SSR1-206ENST00000479365 CCDC88AQ3V6T2 1871 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 VEGFAP15692 232 aaPredicted RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 HOXA10P31260 410 aaPredicted RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 GCGRP47871 477 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 FKBP4Q02790 459 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSR1-206ENST00000479365 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 SYNE4Q8N205 404 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 DNAJC5GQ8N7S2 189 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSR1-206ENST00000479365 DDX21Q9NR30 783 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSR1-206ENST00000479365 ZNF277Q9NRM2 450 aaPredicted RBP9.47□□□□□ -0.89
SSR1-206ENST00000479365 CHPF2Q9P2E5 772 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 WDR90Q96KV7 1748 aa9.47□□□□□ -0.89
SSR1-206ENST00000479365 COL4A5P29400 1685 aa9.46□□□□□ -0.89
SSR1-206ENST00000479365 ALDH1B1P30837 517 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 FSTL1Q12841 308 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 PARP10Q53GL7 1025 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 NLRP10Q86W26 655 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 ZNF541Q9H0D2 1346 aa9.46□□□□□ -0.9
SSR1-206ENST00000479365 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.9
SSR1-206ENST00000479365 HOXB7P09629 217 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 TCIRG1Q13488 830 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 KMT5BQ4FZB7 885 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 SLC10A5Q5PT55 438 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 PPP1R42Q7Z4L9 355 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 SMC1BQ8NDV3 1235 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
SSR1-206ENST00000479365 UTP14AQ9BVJ6 771 aaKnown RBP9.45□□□□□ -0.9
SSR1-206ENST00000479365 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
SSR1-206ENST00000479365 IARSP41252 1262 aaKnown RBP9.44□□□□□ -0.9
SSR1-206ENST00000479365 CRAMP1Q96RY5 1269 aa9.44□□□□□ -0.9
SSR1-206ENST00000479365 PSMD1Q99460 953 aa9.44□□□□□ -0.9
SSR1-206ENST00000479365 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
SSR1-206ENST00000479365 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms