RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 HDGFL2Q7Z4V5 671 aaPredicted RBP8.83□□□□□ -1
HOXB3-209ENST00000478644 MBIPQ9NS73 344 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 THSD7AQ9UPZ6 1657 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 PHRF1Q9P1Y6 1649 aaKnown RBP8.83□□□□□ -1
HOXB3-209ENST00000478644 QRICH2Q9H0J4 1663 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 ABCC6O95255 1503 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 TMEM229AB2RXF0 380 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 THBS1P07996 1170 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 SMTNP53814 917 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 MTFR1Q15390 333 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 CHRNA2Q15822 529 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 WHAMMQ8TF30 809 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 CARD11Q9BXL7 1154 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 NUCKS1Q9H1E3 243 aaKnown RBP8.82□□□□□ -1
HOXB3-209ENST00000478644 TERF2IPQ9NYB0 399 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 TONSLQ96HA7 1378 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 NINLQ9Y2I6 1382 aa8.82□□□□□ -1
HOXB3-209ENST00000478644 TTC21BQ7Z4L5 1316 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 SKIP12755 728 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 KCNMA1Q12791 1236 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
HOXB3-209ENST00000478644 TLR1Q15399 786 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 EML3Q32P44 896 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 DEFB132Q7Z7B7 95 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 ADAMTS19Q8TE59 1207 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
HOXB3-209ENST00000478644 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
HOXB3-209ENST00000478644 WDR17Q8IZU2 1322 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 PLSCR1O15162 318 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 APBA3O96018 575 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 PHKA2P46019 1235 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 DDB1Q16531 1140 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 CDCA8Q53HL2 280 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
HOXB3-209ENST00000478644 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 ARHGEF25Q86VW2 580 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 CAMKK2Q96RR4 588 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 USP35Q9P2H5 1018 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 NOD1Q9Y239 953 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
HOXB3-209ENST00000478644 COL5A2P05997 1499 aaPredicted RBP8.8□□□□□ -1
HOXB3-209ENST00000478644 NRKQ7Z2Y5 1582 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 SLIT3O75094 1523 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 BCL9O00512 1426 aa8.8□□□□□ -1
HOXB3-209ENST00000478644 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
HOXB3-209ENST00000478644 LMO7Q8WWI1 1683 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 CAMTA1Q9Y6Y1 1673 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 USP31Q70CQ4 1352 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 CCDC7Q96M83 1385 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 POM121CA8CG34 1229 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 GPR25O00155 361 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 CDK2AP1O14519 115 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 TRIM37O94972 964 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 CRISPLD1Q9H336 500 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
HOXB3-209ENST00000478644 OVOS2A0A0G2JMS6 1433 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 OVOS2A0A0J9YW53 1432 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 OVOS2Q6IE36 1432 aa8.79□□□□□ -1
HOXB3-209ENST00000478644 EXOC5O00471 708 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 MSX1P28360 303 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 GSK3AP49840 483 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 LYPD4Q6UWN0 246 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 SVOPQ8N4V2 548 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 C1orf216Q8TAB5 229 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 LRRC4BQ9NT99 713 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 LRP5O75197 1615 aa8.78□□□□□ -1
HOXB3-209ENST00000478644 PARP4Q9UKK3 1724 aaKnown RBP8.77□□□□□ -1
HOXB3-209ENST00000478644 A6NJY4 79 aa8.77□□□□□ -1.01
HOXB3-209ENST00000478644 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
HOXB3-209ENST00000478644 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
HOXB3-209ENST00000478644 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
HOXB3-209ENST00000478644 NCOA4Q13772 614 aa8.77□□□□□ -1.01
HOXB3-209ENST00000478644 HDGFL1Q5TGJ6 251 aa8.77□□□□□ -1.01
HOXB3-209ENST00000478644 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
HOXB3-209ENST00000478644 GTF2IP78347 998 aa8.76□□□□□ -1.01
HOXB3-209ENST00000478644 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
HOXB3-209ENST00000478644 UCN2Q96RP3 112 aa8.76□□□□□ -1.01
HOXB3-209ENST00000478644 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
HOXB3-209ENST00000478644 EDC4Q6P2E9 1401 aaKnown RBP8.76□□□□□ -1.01
HOXB3-209ENST00000478644 BACH1O14867 736 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 TMC1Q8TDI8 760 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 NDFIP2Q9NV92 336 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
HOXB3-209ENST00000478644 PHF24Q9UPV7 400 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 AKAP12Q02952 1782 aa8.75□□□□□ -1.01
HOXB3-209ENST00000478644 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
HOXB3-209ENST00000478644 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 ZBTB7CA1YPR0 619 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
HOXB3-209ENST00000478644 MX2P20592 715 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 TMF1P82094 1093 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 EFHC2Q5JST6 749 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms