RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CRHR2Q13324 411 aa18.73■□□□□ 0.59
USP11-207ENST00000478596 SLC4A8Q2Y0W8 1093 aa18.73■□□□□ 0.59
USP11-207ENST00000478596 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
USP11-207ENST00000478596 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
USP11-207ENST00000478596 CAP1Q01518 475 aa18.72■□□□□ 0.59
USP11-207ENST00000478596 SLC9C1Q4G0N8 1177 aa18.72■□□□□ 0.59
USP11-207ENST00000478596 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
USP11-207ENST00000478596 LAMA3Q16787 3333 aa18.72■□□□□ 0.59
USP11-207ENST00000478596 COL4A1P02462 1669 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 USP17L3A6NCW0 530 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 USP17L4A6NCW7 530 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 WNT10BO00744 389 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 APAF1O14727 1248 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 UFL1O94874 794 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
USP11-207ENST00000478596 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 PROSER3Q2NL68 480 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 USP17L1Q7RTZ2 530 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 SLC10A4Q96EP9 437 aa18.71■□□□□ 0.59
USP11-207ENST00000478596 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
USP11-207ENST00000478596 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
USP11-207ENST00000478596 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 PRKG1Q13976 671 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 MAP3K11Q16584 847 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 PODNQ7Z5L7 613 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 GGA1Q9UJY5 639 aa18.7■□□□□ 0.58
USP11-207ENST00000478596 ARHGEF6Q15052 776 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 WNK4Q96J92 1243 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 ANKIB1Q9P2G1 1089 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
USP11-207ENST00000478596 PSME4Q14997 1843 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 A0A1W2PPC1 479 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 UNCXA6NJT0 531 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 ANXA1P04083 346 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
USP11-207ENST00000478596 MMP14P50281 582 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 RIPK4P57078 832 aa18.68■□□□□ 0.58
USP11-207ENST00000478596 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
USP11-207ENST00000478596 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
USP11-207ENST00000478596 DPF3Q92784 378 aa18.67■□□□□ 0.58
USP11-207ENST00000478596 LAMB1P07942 1786 aa18.67■□□□□ 0.58
USP11-207ENST00000478596 TESPA1A2RU30 521 aaPredicted RBP18.66■□□□□ 0.58
USP11-207ENST00000478596 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
USP11-207ENST00000478596 FAM89AQ96GI7 184 aa18.66■□□□□ 0.58
USP11-207ENST00000478596 COL1A1P02452 1464 aaPredicted RBP18.65■□□□□ 0.58
USP11-207ENST00000478596 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
USP11-207ENST00000478596 CLMNQ96JQ2 1002 aa18.65■□□□□ 0.58
USP11-207ENST00000478596 PTPN18Q99952 460 aa18.65■□□□□ 0.58
USP11-207ENST00000478596 WTIPA6NIX2 430 aaPredicted RBP18.64■□□□□ 0.57
USP11-207ENST00000478596 SASH1O94885 1247 aa18.64■□□□□ 0.57
USP11-207ENST00000478596 DACT2Q5SW24 774 aa18.64■□□□□ 0.57
USP11-207ENST00000478596 FZD1Q9UP38 647 aa18.64■□□□□ 0.57
USP11-207ENST00000478596 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
USP11-207ENST00000478596 SOX1O00570 391 aaPredicted RBP18.63■□□□□ 0.57
USP11-207ENST00000478596 ISCA1Q9BUE6 129 aa18.63■□□□□ 0.57
USP11-207ENST00000478596 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
USP11-207ENST00000478596 PPP1R12BO60237 982 aaPredicted RBP18.62■□□□□ 0.57
USP11-207ENST00000478596 MYCP01106 439 aaPredicted RBP18.62■□□□□ 0.57
USP11-207ENST00000478596 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
USP11-207ENST00000478596 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
USP11-207ENST00000478596 SHISA4Q96DD7 197 aa18.62■□□□□ 0.57
USP11-207ENST00000478596 ZBED3Q96IU2 234 aaPredicted RBP18.62■□□□□ 0.57
USP11-207ENST00000478596 XDHP47989 1333 aa18.62■□□□□ 0.57
USP11-207ENST00000478596 IRS4O14654 1257 aaPredicted RBP18.61■□□□□ 0.57
USP11-207ENST00000478596 GJA5P36382 358 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 HTATIP2Q9BUP3 242 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 MXD3Q9BW11 206 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 DEFB129Q9H1M3 183 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 NR2E3Q9Y5X4 410 aa18.61■□□□□ 0.57
USP11-207ENST00000478596 SSC5DA1L4H1 1573 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 ATP2B4P23634 1241 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 CALD1Q05682 793 aaKnown RBP18.6■□□□□ 0.57
USP11-207ENST00000478596 STRIP1Q5VSL9 837 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 GPR153Q6NV75 609 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 LRCH3Q96II8 777 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
USP11-207ENST00000478596 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
USP11-207ENST00000478596 PLBD2Q8NHP8 589 aa18.59■□□□□ 0.57
USP11-207ENST00000478596 COL25A1Q9BXS0 654 aaPredicted RBP18.59■□□□□ 0.57
USP11-207ENST00000478596 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
USP11-207ENST00000478596 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
USP11-207ENST00000478596 TRIM28Q13263 835 aaKnown RBP18.58■□□□□ 0.56
USP11-207ENST00000478596 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
USP11-207ENST00000478596 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.58■□□□□ 0.56
USP11-207ENST00000478596 MED23Q9ULK4 1368 aa18.57■□□□□ 0.56
USP11-207ENST00000478596 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
USP11-207ENST00000478596 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
USP11-207ENST00000478596 MS4A4AQ96JQ5 239 aa18.57■□□□□ 0.56
USP11-207ENST00000478596 ZFYVE28Q9HCC9 887 aa18.57■□□□□ 0.56
USP11-207ENST00000478596 STXBP5LQ9Y2K9 1186 aa18.57■□□□□ 0.56
USP11-207ENST00000478596 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
USP11-207ENST00000478596 GNRH1P01148 92 aa18.56■□□□□ 0.56
USP11-207ENST00000478596 HSP90B1P14625 803 aaKnown RBP18.56■□□□□ 0.56
USP11-207ENST00000478596 IREB2P48200 963 aaKnown RBP18.56■□□□□ 0.56
USP11-207ENST00000478596 PRMT2P55345 433 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms