RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
NPHP4-208ENST00000478423 IGSF1Q8N6C5 1336 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 CDR1P51861 262 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 CCNL1Q9UK58 526 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-208ENST00000478423 PICALMQ13492 652 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 TNIP1Q15025 636 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 TXLNBQ8N3L3 684 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 GNAQP50148 359 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 SEPT11Q9NVA2 429 aaKnown RBP16.36■□□□□ 0.21
NPHP4-208ENST00000478423 USP6P35125 1406 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 ATP7BP35670 1465 aa16.36■□□□□ 0.21
NPHP4-208ENST00000478423 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 SNX14Q9Y5W7 946 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
NPHP4-208ENST00000478423 CALML4Q96GE6 196 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 SLC27A2O14975 620 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-208ENST00000478423 FKBP15Q5T1M5 1219 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 KANK3Q6NY19 840 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-208ENST00000478423 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 TRMT1Q9NXH9 659 aaKnown RBP16.35■□□□□ 0.21
NPHP4-208ENST00000478423 SYNMO15061 1565 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 APPBP2Q92624 585 aa16.35■□□□□ 0.21
NPHP4-208ENST00000478423 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
NPHP4-208ENST00000478423 UVSSAQ2YD98 709 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 TMC6Q7Z403 805 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 SPTLC2O15270 562 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 WWC2Q6AWC2 1192 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 TRMT1LQ7Z2T5 733 aaKnown RBP16.34■□□□□ 0.21
NPHP4-208ENST00000478423 UBXN4Q92575 508 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 TAF5LO75529 589 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
NPHP4-208ENST00000478423 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
NPHP4-208ENST00000478423 KIF2AO00139 706 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-208ENST00000478423 ZSCAN12O43309 604 aa16.33■□□□□ 0.21
NPHP4-208ENST00000478423 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.21
NPHP4-208ENST00000478423 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.21
NPHP4-208ENST00000478423 GPAA1O43292 621 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 BMP15O95972 392 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-208ENST00000478423 TSG101Q99816 390 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 TSPOAP1O95153 1857 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 ANO6Q4KMQ2 910 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 ABCC3O15438 1527 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 DTNBO60941 627 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 OGFOD1Q8N543 542 aa16.33■□□□□ 0.2
NPHP4-208ENST00000478423 C16orf45Q96MC5 204 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-208ENST00000478423 B4E1Z4 1266 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 AFMP43652 599 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 AMPD3Q01432 767 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
NPHP4-208ENST00000478423 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 GSDMDP57764 484 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 KIF1BO60333 1816 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 LPIN2Q92539 896 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 KIF20AO95235 890 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 PLCG2P16885 1265 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 SPA17Q15506 151 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
NPHP4-208ENST00000478423 HSP90AA4PQ58FG1 418 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
NPHP4-208ENST00000478423 NEMFO60524 1076 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-208ENST00000478423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.2
NPHP4-208ENST00000478423 CALM1P0DP23 149 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 CALM2P0DP24 149 aa16.3■□□□□ 0.2
NPHP4-208ENST00000478423 CALM3P0DP25 149 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms