RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 BTBD6Q96KE9 485 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 HMX1Q9NP08 348 aaPredicted RBP6.34□□□□□ -1.39
SF3B6-202ENST00000478050 GGA1Q9UJY5 639 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 CDC42BPGQ6DT37 1551 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 A0A1B0GTH6 734 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 SH3D19Q5HYK7 790 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 EFHC2Q5JST6 749 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 SLCO4C1Q6ZQN7 724 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
SF3B6-202ENST00000478050 TCP11L2Q8N4U5 519 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 TERF2IPQ9NYB0 399 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
SF3B6-202ENST00000478050 TRPC5Q9UL62 973 aaPredicted RBP6.33□□□□□ -1.4
SF3B6-202ENST00000478050 ATXN7L1Q9ULK2 861 aaPredicted RBP6.33□□□□□ -1.4
SF3B6-202ENST00000478050 AKAP12Q02952 1782 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 ATP7BP35670 1465 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 MON2Q7Z3U7 1717 aa6.33□□□□□ -1.4
SF3B6-202ENST00000478050 XIRP1Q702N8 1843 aaKnown RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 BCAR3O75815 825 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 CANXP27824 592 aaKnown RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 CHRNA4P43681 627 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 LBRQ14739 615 aaKnown RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 GNASQ5JWF2 1037 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
SF3B6-202ENST00000478050 MYH16Q9H6N6 1097 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 POGKQ9P215 609 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 NLRP1Q9C000 1473 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 CD163L1Q9NR16 1453 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 NRXN3Q9Y4C0 1643 aa6.32□□□□□ -1.4
SF3B6-202ENST00000478050 BCL9LQ86UU0 1499 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 THBS1P07996 1170 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 TNNT2P45379 298 aaPredicted RBP6.31□□□□□ -1.4
SF3B6-202ENST00000478050 CENPCQ03188 943 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
SF3B6-202ENST00000478050 CNKSR1Q969H4 720 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
SF3B6-202ENST00000478050 PNNQ9H307 717 aaKnown RBP6.31□□□□□ -1.4
SF3B6-202ENST00000478050 RUBCNLQ9H714 662 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 RAB6BQ9NRW1 208 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 STK26Q9P289 416 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 PCDHB11Q9Y5F2 797 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 RIMS2Q9UQ26 1411 aa6.31□□□□□ -1.4
SF3B6-202ENST00000478050 IL16Q14005 1332 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 MAPK8IP3Q9UPT6 1336 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 C2CD2LO14523 706 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 PPM1GO15355 546 aaPredicted RBP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 EPXP11678 715 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 FGFR3P22607 806 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 GATA4P43694 442 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 SCTRP47872 440 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 PRELPP51888 382 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 RARSP54136 660 aaKnown RBP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 CTBSQ01459 385 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 MCM6Q14566 821 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 TMEM214Q6NUQ4 689 aaKnown RBP6.3□□□□□ -1.4
SF3B6-202ENST00000478050 CCDC82Q8N4S0 544 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 PMFBP1Q8TBY8 1022 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 ESYT1Q9BSJ8 1104 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 USP21Q9UK80 565 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 DLG5Q8TDM6 1919 aa6.3□□□□□ -1.4
SF3B6-202ENST00000478050 A6NJR5 290 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 NEURL1BA8MQ27 555 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 TRAK2O60296 914 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 GNRH1P01148 92 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 ITGB7P26010 798 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 MCCD1P59942 119 aaPredicted RBP6.29□□□□□ -1.4
SF3B6-202ENST00000478050 SAFB2Q14151 953 aaKnown RBP eCLIP6.29□□□□□ -1.4
SF3B6-202ENST00000478050 R3HDM1Q15032 1099 aaKnown RBP6.29□□□□□ -1.4
SF3B6-202ENST00000478050 UBR1Q8IWV7 1749 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 ZNF592Q92610 1267 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 OSBPL3Q9H4L5 887 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 RRP7AQ9Y3A4 280 aaKnown RBP6.29□□□□□ -1.4
SF3B6-202ENST00000478050 PNPLA6Q8IY17 1366 aa6.29□□□□□ -1.4
SF3B6-202ENST00000478050 FYB1O15117 783 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 FBXO45P0C2W1 286 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 ARAFP10398 606 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 KCNA6P17658 529 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 MSX1P28360 303 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 C8orf34Q49A92 452 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 RNF135Q8IUD6 432 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B6-202ENST00000478050 PANK1Q8TE04 598 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 PLEKHF1Q96S99 279 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 CDK19Q9BWU1 502 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 GGNBP2Q9H3C7 697 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
SF3B6-202ENST00000478050 COG6Q9Y2V7 657 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms