RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 UFL1O94874 794 aa9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 MYCP01106 439 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 OTUD7BQ6GQQ9 843 aa9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 UBE2Q1Q7Z7E8 422 aa9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 CLMNQ96JQ2 1002 aa9.7□□□□□ -0.86
SPTLC1-205ENST00000477888 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 UNCXA6NJT0 531 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 LRRC37AA6NMS7 1700 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 EIF2S2P20042 333 aaKnown RBP9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 DACT2Q5SW24 774 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 FAM89AQ96GI7 184 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
SPTLC1-205ENST00000477888 GJA5P36382 358 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 MMP14P50281 582 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 AIMP1Q12904 312 aaKnown RBP9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 ARHGEF6Q15052 776 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 OGFOD1Q8N543 542 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 SH3TC2Q8TF17 1288 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 ZBED3Q96IU2 234 aaPredicted RBP9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 MXD3Q9BW11 206 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 UNC80Q8N2C7 3258 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
SPTLC1-205ENST00000477888 COL4A1P02462 1669 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 ZBTB7BO15156 539 aaPredicted RBP9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 SASH1O94885 1247 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 APOBEC3FQ8IUX4 373 aaKnown RBP9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 DEFB129Q9H1M3 183 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 SEC31BQ9NQW1 1179 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 ANKRD36CQ5JPF3 1778 aa9.67□□□□□ -0.86
SPTLC1-205ENST00000477888 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
SPTLC1-205ENST00000477888 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
SPTLC1-205ENST00000477888 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
SPTLC1-205ENST00000477888 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
SPTLC1-205ENST00000477888 NR2E3Q9Y5X4 410 aa9.66□□□□□ -0.86
SPTLC1-205ENST00000477888 LAMB4A4D0S4 1761 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 VCANP13611 3396 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 CNGB1Q14028 1251 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 MTFR1Q15390 333 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 HTATIP2Q9BUP3 242 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 TAF1P21675 1872 aa9.65□□□□□ -0.86
SPTLC1-205ENST00000477888 XDHP47989 1333 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 MYO3BQ8WXR4 1341 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 ATP5J2-PTCD1G3V325 749 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 USP2O75604 605 aaPredicted RBP9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 GJA8P48165 433 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 TRIM28Q13263 835 aaKnown RBP9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 NKX2-3Q8TAU0 364 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 LAMB2P55268 1798 aa9.64□□□□□ -0.87
SPTLC1-205ENST00000477888 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 GNRH1P01148 92 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 GJB1P08034 283 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 SUPT20HL1Q3ZLR7 823 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 ANKRD13AQ8IZ07 590 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 MTMR10Q9NXD2 777 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
SPTLC1-205ENST00000477888 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 PRMT2P55345 433 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 LACTBP83111 547 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 NBPF12Q5TAG4 269 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 Q7L0L9 218 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 KIAA0825Q8IV33 1275 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 FAM43AQ8N2R8 423 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 OPTNQ96CV9 577 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 PLEKHF1Q96S99 279 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 COA1Q9GZY4 146 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 PPP2R3BQ9Y5P8 575 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
SPTLC1-205ENST00000477888 COL1A1P02452 1464 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 TLR2O60603 784 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 BMP8BP34820 402 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 TTLL5Q6EMB2 1281 aa9.61□□□□□ -0.87
SPTLC1-205ENST00000477888 TXNRD3Q86VQ6 643 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms