RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 NUP133Q8WUM0 1156 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 RGPD1P0DJD0 1748 aa11.42□□□□□ -0.58
CMC1-209ENST00000477739 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 PGBD1Q96JS3 809 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 NALCNQ8IZF0 1738 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 CYP21A2P08686 494 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 PPARDQ03181 441 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 MTX1Q13505 466 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 PUS3Q9BZE2 481 aaKnown RBP11.41□□□□□ -0.58
CMC1-209ENST00000477739 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
CMC1-209ENST00000477739 EPC1Q9H2F5 836 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 IFNKQ9P0W0 207 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 SCRN1Q12765 414 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 LRRC24Q50LG9 513 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 TTC39AQ5SRH9 613 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 SYT10Q6XYQ8 523 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 PHKBQ93100 1093 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 TMEM94Q12767 1356 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 KLF18A0A0U1RQI7 1052 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 URI1O94763 535 aaPredicted RBP11.4□□□□□ -0.58
CMC1-209ENST00000477739 MCM5P33992 734 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
CMC1-209ENST00000477739 ZNF215Q9UL58 517 aaPredicted RBP11.4□□□□□ -0.58
CMC1-209ENST00000477739 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 CYP27B1O15528 508 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 ZNF75DP51815 510 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 KIAA1524Q8TCG1 905 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 KAZALD1Q96I82 304 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 C8orf76Q96K31 380 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
CMC1-209ENST00000477739 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
CMC1-209ENST00000477739 PDIA6Q15084 440 aa11.39□□□□□ -0.59
CMC1-209ENST00000477739 NECTIN1Q15223 517 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 CEP57L1Q8IYX8 460 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 HINFPQ9BQA5 517 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 DNAI1Q9UI46 699 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 EPB41L2O43491 1005 aaKnown RBP11.38□□□□□ -0.59
CMC1-209ENST00000477739 TNNI3KQ59H18 835 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 CFAP45Q9UL16 551 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 FPGT-TNNI3KV9GXZ4 949 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
CMC1-209ENST00000477739 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
CMC1-209ENST00000477739 NRDCO43847 1150 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 TRDNQ13061 729 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 STAMQ92783 540 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 EEF2KMTQ96G04 330 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 FAM170AA1A519 330 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 TAF5LO75529 589 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 DDX19AQ9NUU7 478 aaKnown RBP11.37□□□□□ -0.59
CMC1-209ENST00000477739 NCAPD2Q15021 1401 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 CCDC57Q2TAC2 916 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 RASSF8Q8NHQ8 419 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 MAP4K1Q92918 833 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 CCDC34Q96HJ3 373 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
CMC1-209ENST00000477739 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
CMC1-209ENST00000477739 ADORA1P30542 326 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 STX17P56962 302 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 ERCC6LQ2NKX8 1250 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 TRMT44Q8IYL2 757 aaKnown RBP11.36□□□□□ -0.59
CMC1-209ENST00000477739 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
CMC1-209ENST00000477739 SFPQP23246 707 aaKnown RBP eCLIP11.36□□□□□ -0.59
CMC1-209ENST00000477739 KARSQ15046 597 aaKnown RBP11.36□□□□□ -0.59
CMC1-209ENST00000477739 DPCR1Q3MIW9 517 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 PAG1Q9NWQ8 432 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
CMC1-209ENST00000477739 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 GTF2F1P35269 517 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMC1-209ENST00000477739 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
CMC1-209ENST00000477739 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 PLBD2Q8NHP8 589 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 CLSTN2Q9H4D0 955 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
CMC1-209ENST00000477739 NDUFA8P51970 172 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
CMC1-209ENST00000477739 ABCF2Q9UG63 623 aa11.35□□□□□ -0.59
CMC1-209ENST00000477739 NFAT5O94916 1531 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 A0A1B0GUL7 405 aa11.34□□□□□ -0.59
CMC1-209ENST00000477739 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms