RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 PTPN18Q99952 460 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 STAP2Q9UGK3 403 aa13.71□□□□□ -0.21
TRAIP-206ENST00000477546 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
TRAIP-206ENST00000477546 COL9A1P20849 921 aa13.7□□□□□ -0.22
TRAIP-206ENST00000477546 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
TRAIP-206ENST00000477546 GJA8P48165 433 aa13.7□□□□□ -0.22
TRAIP-206ENST00000477546 MTFR1Q15390 333 aa13.7□□□□□ -0.22
TRAIP-206ENST00000477546 TAF1P21675 1872 aa13.7□□□□□ -0.22
TRAIP-206ENST00000477546 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-206ENST00000477546 VCANP13611 3396 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 EVI5O60447 810 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 UFL1O94874 794 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 BMP8BP34820 402 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 FZD1Q9UP38 647 aa13.69□□□□□ -0.22
TRAIP-206ENST00000477546 COL1A1P02452 1464 aaPredicted RBP13.68□□□□□ -0.22
TRAIP-206ENST00000477546 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
TRAIP-206ENST00000477546 PPP1R12BO60237 982 aaPredicted RBP13.68□□□□□ -0.22
TRAIP-206ENST00000477546 GNRH1P01148 92 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 GJB1P08034 283 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 GJA5P36382 358 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 PRMT2P55345 433 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 SF3B3Q15393 1217 aaKnown RBP13.68□□□□□ -0.22
TRAIP-206ENST00000477546 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
TRAIP-206ENST00000477546 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
TRAIP-206ENST00000477546 PSME4Q14997 1843 aa13.67□□□□□ -0.22
TRAIP-206ENST00000477546 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
TRAIP-206ENST00000477546 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
TRAIP-206ENST00000477546 GDF15Q99988 308 aa13.67□□□□□ -0.22
TRAIP-206ENST00000477546 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
TRAIP-206ENST00000477546 SASH1O94885 1247 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 MMP14P50281 582 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
TRAIP-206ENST00000477546 KIF22Q14807 665 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 TAF1CQ15572 869 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-206ENST00000477546 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
TRAIP-206ENST00000477546 RPTORQ8N122 1335 aa13.65□□□□□ -0.22
TRAIP-206ENST00000477546 RPS8P62241 208 aaKnown RBP13.65□□□□□ -0.22
TRAIP-206ENST00000477546 LACTBP83111 547 aaPredicted RBP13.65□□□□□ -0.22
TRAIP-206ENST00000477546 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
TRAIP-206ENST00000477546 PNISRQ8TF01 805 aaKnown RBP13.65□□□□□ -0.22
TRAIP-206ENST00000477546 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
TRAIP-206ENST00000477546 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
TRAIP-206ENST00000477546 COL4A1P02462 1669 aa13.65□□□□□ -0.22
TRAIP-206ENST00000477546 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
TRAIP-206ENST00000477546 PLA2G5P39877 138 aa13.64□□□□□ -0.23
TRAIP-206ENST00000477546 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
TRAIP-206ENST00000477546 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
TRAIP-206ENST00000477546 CCL5P13501 91 aa13.63□□□□□ -0.23
TRAIP-206ENST00000477546 IREB2P48200 963 aaKnown RBP13.63□□□□□ -0.23
TRAIP-206ENST00000477546 BCAMP50895 628 aa13.63□□□□□ -0.23
TRAIP-206ENST00000477546 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
TRAIP-206ENST00000477546 RNF208Q9H0X6 261 aa13.63□□□□□ -0.23
TRAIP-206ENST00000477546 PPP2R3BQ9Y5P8 575 aa13.63□□□□□ -0.23
TRAIP-206ENST00000477546 GRK4P32298 578 aa13.62□□□□□ -0.23
TRAIP-206ENST00000477546 PDIA6Q15084 440 aa13.62□□□□□ -0.23
TRAIP-206ENST00000477546 ANKRD13AQ8IZ07 590 aa13.62□□□□□ -0.23
TRAIP-206ENST00000477546 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
TRAIP-206ENST00000477546 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
TRAIP-206ENST00000477546 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
TRAIP-206ENST00000477546 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
TRAIP-206ENST00000477546 SPTBN5Q9NRC6 3674 aaKnown RBP13.61□□□□□ -0.23
TRAIP-206ENST00000477546 TLR2O60603 784 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
TRAIP-206ENST00000477546 SUPT20HL1Q3ZLR7 823 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 RIPOR2Q9Y4F9 1068 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 TTC28Q96AY4 2481 aa13.61□□□□□ -0.23
TRAIP-206ENST00000477546 CAPN2P17655 700 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 SRRDQ9UH36 339 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 XDHP47989 1333 aa13.6□□□□□ -0.23
TRAIP-206ENST00000477546 CCL15-CCL14A0A0B4J2E2 113 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 USP2O75604 605 aaPredicted RBP13.59□□□□□ -0.23
TRAIP-206ENST00000477546 GTF2A2P52657 109 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 UBXN2AP68543 259 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 CCL15Q16663 113 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 SYMPKQ92797 1274 aaKnown RBP13.59□□□□□ -0.23
TRAIP-206ENST00000477546 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
TRAIP-206ENST00000477546 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms