RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 FEZ2Q9UHY8 353 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 ADCY9O60503 1353 aa17.8■□□□□ 0.44
CLSTN1-205ENST00000477264 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 ST7Q9NRC1 585 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 PLA2G4AP47712 749 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 EIF4A1P60842 406 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 FAM173BQ6P4H8 233 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 PPP1R13BQ96KQ4 1090 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 TRMT1Q9NXH9 659 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-205ENST00000477264 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 ARID5BQ14865 1188 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 ERCC6LQ2NKX8 1250 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 CCDC73Q6ZRK6 1079 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 DHX40Q8IX18 779 aaKnown RBP17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 NFATC2IPQ8NCF5 419 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 GTF3C6Q969F1 213 aa17.78■□□□□ 0.44
CLSTN1-205ENST00000477264 SLC27A2O14975 620 aa17.77■□□□□ 0.44
CLSTN1-205ENST00000477264 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
CLSTN1-205ENST00000477264 CWC15Q9P013 229 aaKnown RBP17.77■□□□□ 0.44
CLSTN1-205ENST00000477264 USP16Q9Y5T5 823 aa17.77■□□□□ 0.44
CLSTN1-205ENST00000477264 NWD2Q9ULI1 1742 aa17.77■□□□□ 0.44
CLSTN1-205ENST00000477264 HOXB7P09629 217 aa17.77■□□□□ 0.43
CLSTN1-205ENST00000477264 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.43
CLSTN1-205ENST00000477264 BPIFA3Q9BQP9 254 aa17.77■□□□□ 0.43
CLSTN1-205ENST00000477264 NRAPQ86VF7 1730 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 KINO60870 393 aaKnown RBP17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 CABP4P57796 275 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 MTX1Q13505 466 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 UBXN4Q92575 508 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 UBXN6Q9BZV1 441 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 KCNQ3O43525 872 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 KRT32Q14532 448 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 HDGFL1Q5TGJ6 251 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 E4F1Q66K89 784 aaPredicted RBP17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
CLSTN1-205ENST00000477264 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
CLSTN1-205ENST00000477264 CTR9Q6PD62 1173 aa17.75■□□□□ 0.43
CLSTN1-205ENST00000477264 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
CLSTN1-205ENST00000477264 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
CLSTN1-205ENST00000477264 MRC1P22897 1456 aa17.75■□□□□ 0.43
CLSTN1-205ENST00000477264 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 TOB2Q14106 344 aaPredicted RBP17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 EFCAB8A8MWE9 144 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 FAM160A1Q05DH4 1040 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 NAA16Q6N069 864 aaPredicted RBP17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 SYT10Q6XYQ8 523 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 TTC5Q8N0Z6 440 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 DNAI1Q9UI46 699 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
CLSTN1-205ENST00000477264 H3BQV1 296 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 EIF2S2P20042 333 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 ETF1P62495 437 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 CCAR1Q8IX12 1150 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 MNS1Q8NEH6 495 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 RASSF4Q9H2L5 321 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 PSD3Q9NYI0 1048 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 SLIT2O94813 1529 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 AOPEPQ8N6M6 819 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 BRF1Q92994 677 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 WNK3Q9BYP7 1800 aa17.73■□□□□ 0.43
CLSTN1-205ENST00000477264 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 EXOC5O00471 708 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 TADA3O75528 432 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 AK7Q96M32 723 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
CLSTN1-205ENST00000477264 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
CLSTN1-205ENST00000477264 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
CLSTN1-205ENST00000477264 ENGASEQ8NFI3 743 aa17.7■□□□□ 0.42
CLSTN1-205ENST00000477264 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms