RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 ATP5JP18859 108 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 GTF2F1P35269 517 aaKnown RBP eCLIP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 KBTBD3Q8NAB2 608 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
GSDMB-208ENST00000477054 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
GSDMB-208ENST00000477054 USP8P40818 1118 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 NAP1L1P55209 391 aaKnown RBP11.24□□□□□ -0.61
GSDMB-208ENST00000477054 PKP1Q13835 747 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 BMS1Q14692 1282 aaKnown RBP11.24□□□□□ -0.61
GSDMB-208ENST00000477054 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
GSDMB-208ENST00000477054 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
GSDMB-208ENST00000477054 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 EPS15P42566 896 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 SYKP43405 635 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC186Q7Z3E2 898 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CAGE1Q8TC20 777 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 TTC12Q9H892 705 aaPredicted RBP11.24□□□□□ -0.61
GSDMB-208ENST00000477054 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 ZPR1O75312 459 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 TIMM10P62072 90 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 TMC6Q7Z403 805 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
GSDMB-208ENST00000477054 GADD45BO75293 160 aaPredicted RBP11.23□□□□□ -0.61
GSDMB-208ENST00000477054 WTAPQ15007 396 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 EAF2Q96CJ1 260 aaPredicted RBP11.23□□□□□ -0.61
GSDMB-208ENST00000477054 PHKG2P15735 406 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 USP5P45974 858 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 KANK3Q6NY19 840 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 BRAPQ7Z569 592 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 TXLNBQ8N3L3 684 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 PIBF1Q8WXW3 757 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 SPTLC2O15270 562 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
GSDMB-208ENST00000477054 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
GSDMB-208ENST00000477054 PIK3C2BO00750 1634 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 IRS4O14654 1257 aaPredicted RBP11.23□□□□□ -0.61
GSDMB-208ENST00000477054 PTH1RQ03431 593 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 UNC5CLQ8IV45 518 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
GSDMB-208ENST00000477054 ADAMTS2O95450 1211 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 RDXP35241 583 aaKnown RBP11.22□□□□□ -0.61
GSDMB-208ENST00000477054 GAS2L3Q86XJ1 694 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 UBXN4Q92575 508 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■■□ 20.3
GSDMB-208ENST00000477054 CUL4AQ13619 759 aa11.22□□□□□ -0.61
GSDMB-208ENST00000477054 TRMT1Q9NXH9 659 aaKnown RBP11.22□□□□□ -0.61
GSDMB-208ENST00000477054 IKQ13123 557 aaPredicted RBP11.21□□□□□ -0.61
GSDMB-208ENST00000477054 ME3Q16798 604 aa11.21□□□□□ -0.61
GSDMB-208ENST00000477054 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
GSDMB-208ENST00000477054 SLC4A4Q9Y6R1 1079 aa11.21□□□□□ -0.61
GSDMB-208ENST00000477054 GNAT2P19087 354 aa11.21□□□□□ -0.61
GSDMB-208ENST00000477054 RTN1Q16799 776 aa11.21□□□□□ -0.61
GSDMB-208ENST00000477054 POLA2Q14181 598 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 KLHL10Q6JEL2 608 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 GPT2Q8TD30 523 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.622e-7■■■□□ 17.7
GSDMB-208ENST00000477054 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.62
GSDMB-208ENST00000477054 NLRP5P59047 1200 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 AOPEPQ8N6M6 819 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 ESR2Q92731 530 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 RUFY1Q96T51 708 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.62
GSDMB-208ENST00000477054 CLSTN2Q9H4D0 955 aa11.21□□□□□ -0.62
GSDMB-208ENST00000477054 A0A0D9SFI3 127 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
GSDMB-208ENST00000477054 ERLIN1O75477 346 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 A1BGP04217 495 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 CYP7A1P22680 504 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 KIF5BP33176 963 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 CEP135Q66GS9 1140 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 LUZP1Q86V48 1076 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 GPATCH11Q8N954 259 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
GSDMB-208ENST00000477054 APPBP2Q92624 585 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 DSCC1Q9BVC3 393 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 BMP15O95972 392 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 KRT18P05783 430 aaKnown RBP11.2□□□□□ -0.62
GSDMB-208ENST00000477054 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 PDE4BQ07343 736 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 FAM89AQ96GI7 184 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
GSDMB-208ENST00000477054 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms