RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 MCM6Q14566 821 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CRYMQ14894 314 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CPDO75976 1380 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 KIAA0232Q92628 1395 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ZSCAN9O15535 394 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PYGLP06737 847 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 NEDD9Q14511 834 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 LRRC31Q6UY01 552 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 IQCGQ9H095 443 aaKnown RBP9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PSD3Q9NYI0 1048 aa9.67□□□□□ -0.86
CNTNAP3B-205ENST00000476961 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 COL18A1P39060 1754 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 USP8P40818 1118 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 MTHFSDQ2M296 383 aaKnown RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 GBP6Q6ZN66 633 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 TDRD7Q8NHU6 1098 aaKnown RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 THUMPD2Q9BTF0 503 aaKnown RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 FAM83GA6ND36 823 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ACTN2P35609 894 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 IFT88Q13099 833 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 ANKRD45Q5TZF3 282 aa9.66□□□□□ -0.86
CNTNAP3B-205ENST00000476961 PRPHP41219 470 aa9.65□□□□□ -0.86
CNTNAP3B-205ENST00000476961 SNX1Q13596 522 aa9.65□□□□□ -0.86
CNTNAP3B-205ENST00000476961 C17orf50Q8WW18 174 aa9.65□□□□□ -0.86
CNTNAP3B-205ENST00000476961 IPO5O00410 1097 aaKnown RBP9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 DCTN1Q14203 1278 aa9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 REXO1L1PQ8IX06 675 aa9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CCDC112Q8NEF3 446 aa9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CTCFLQ8NI51 663 aaPredicted RBP9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TBC1D5Q92609 795 aa9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 MCM8Q9UJA3 840 aa9.65□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ABCC6O95255 1503 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RGPD2P0DJD1 1756 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ABCA3Q99758 1704 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 DLG5Q8TDM6 1919 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TOM1O60784 492 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 C16orf87Q6PH81 154 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 UBXN6Q9BZV1 441 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RGPD5Q99666 1765 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PNMA6AP0CW24 399 aaPredicted RBP9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PARD3BQ8TEW8 1205 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 BICD1Q96G01 975 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CCDC34Q96HJ3 373 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 AK7Q96M32 723 aa9.64□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CAMTA1Q9Y6Y1 1673 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 POLR3GO15318 223 aaPredicted RBP9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PYGBP11216 843 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RAB27AP51159 221 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TSNAXIP1Q2TAA8 658 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CWC27Q6UX04 472 aaKnown RBP9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TRIM42Q8IWZ5 723 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 N4BP2L2Q92802 583 aaPredicted RBP9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PRDM11Q9NQV5 511 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 LMBRD1Q9NUN5 540 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 LMO7Q8WWI1 1683 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 H2AFXP16104 143 aaPredicted RBP9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 CCDC125Q86Z20 511 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 EXOC4Q96A65 974 aa9.63□□□□□ -0.87
CNTNAP3B-205ENST00000476961 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RPS6KA5O75582 802 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 MCM10Q7L590 875 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ELOA2Q8IYF1 753 aaPredicted RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 A0A087WUV0 522 aaPredicted RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ZRANB2O95218 330 aaKnown RBP eCLIP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 MRPL12P52815 198 aaKnown RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 HSP90B2PQ58FF3 399 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ANKRD18AQ8IVF6 992 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 ARL10Q8N8L6 244 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 SNRNP27Q8WVK2 155 aaKnown RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 MRFAP1L1Q96HT8 127 aa9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
CNTNAP3B-205ENST00000476961 KIF2AO00139 706 aaPredicted RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 TPP2P29144 1249 aaPredicted RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RDXP35241 583 aaKnown RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 EXOSC9Q06265 439 aaKnown RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 IFT57Q9NWB7 429 aa9.61□□□□□ -0.87
CNTNAP3B-205ENST00000476961 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms