RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CRAMP1	Q96RY5	1269 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	WDR70	Q9NW82	654 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	ARIH1	Q9Y4X5	557 aa	Predicted RBP	9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	SIPA1L3	O60292	1781 aa	Predicted RBP	9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	SZT2	Q5T011	3432 aa		9.77	□□□□□ -0.85
HDAC9-223	ENST00000476135	PPEF1	O14829	653 aa	Predicted RBP	9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	MAP3K7	O43318	606 aa		9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	DPF2	Q92785	391 aa		9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	DCPS	Q96C86	337 aa	Known RBP	9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	RBM17	Q96I25	401 aa	Known RBP	9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	CFHR5	Q9BXR6	569 aa		9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	RTFDC1	Q9BY42	306 aa	Predicted RBP	9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	NYX	Q9GZU5	481 aa		9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	TMX4	Q9H1E5	349 aa	Predicted RBP	9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	TRIOBP	Q9H2D6	2365 aa		9.76	□□□□□ -0.85
HDAC9-223	ENST00000476135	SHTN1	A0MZ66	631 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	ADM5	C9JUS6	153 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	FKTN	O75072	461 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	RAD17	O75943	681 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	TM4SF4	P48230	202 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	MTHFSD	Q2M296	383 aa	Known RBP	9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	PITPNM2	Q9BZ72	1349 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135	ABCC12	Q96J65	1359 aa		9.75	□□□□□ -0.85
HDAC9-223	ENST00000476135		A0A0C4DFX4	3053 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	SOWAHB	A6NEL2	793 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	FKBP1B	P68106	108 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	KIAA2012	Q0VF49	1180 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	TEF	Q10587	303 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	SAMD7	Q7Z3H4	446 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	ATP6V0A2	Q9Y487	856 aa		9.74	□□□□□ -0.85
HDAC9-223	ENST00000476135	KIAA0100	Q14667	2235 aa	Known RBP	9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	TCERG1	O14776	1098 aa	Known RBP	9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	EN2	P19622	333 aa	Predicted RBP	9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	PIP4K2A	P48426	406 aa	Predicted RBP	9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	SLC51A	Q86UW1	340 aa		9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	USP16	Q9Y5T5	823 aa		9.73	□□□□□ -0.85
HDAC9-223	ENST00000476135	PRAMEF22	A3QJZ6	481 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	GRXCR2	A6NFK2	248 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135		H0YGN5	161 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	HLF	Q16534	295 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	NUTM1	Q86Y26	1132 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	SULF1	Q8IWU6	871 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	CDCA5	Q96FF9	252 aa		9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.72	□□□□□ -0.85
HDAC9-223	ENST00000476135	HTT	P42858	3142 aa		9.71	□□□□□ -0.85
HDAC9-223	ENST00000476135	CEP290	O15078	2479 aa		9.71	□□□□□ -0.85
HDAC9-223	ENST00000476135	YDJC	A8MPS7	323 aa		9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	EGFR	P00533	1210 aa		9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	RPS12	P25398	132 aa	Known RBP	9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	DPP8	Q6V1X1	898 aa	Predicted RBP	9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	IL17RE	Q8NFR9	667 aa		9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	ARMC5	Q96C12	935 aa		9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	TRIM17	Q9Y577	477 aa		9.71	□□□□□ -0.86
HDAC9-223	ENST00000476135	NUP98	P52948	1817 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	COL6A3	P12111	3177 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	NBPF26	B4DH59	902 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	HMOX1	P09601	288 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	SREBF2	Q12772	1141 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	NBPF10	Q6P3W6	841 aa	Known RBP	9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	OTOP1	Q7RTM1	612 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	SP8	Q8IXZ3	490 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	MPND	Q8N594	471 aa		9.7	□□□□□ -0.86
HDAC9-223	ENST00000476135	GNAT3	A8MTJ3	354 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	ERVV-1	B6SEH8	477 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	PSMD14	O00487	310 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	KCNQ3	O43525	872 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	BBOX1	O75936	387 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	SNRPA1	P09661	255 aa	Known RBP	9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	RBM26	Q5T8P6	1007 aa	Known RBP	9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	MORC1	Q86VD1	984 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	PACS2	Q86VP3	889 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	CDCA7L	Q96GN5	454 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	R3HDML	Q9H3Y0	253 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	GGA3	Q9NZ52	723 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	RBM27	Q9P2N5	1060 aa	Known RBP	9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	PTPN22	Q9Y2R2	807 aa		9.69	□□□□□ -0.86
HDAC9-223	ENST00000476135	BTBD11	A6QL63	1104 aa		9.68	□□□□□ -0.86
HDAC9-223	ENST00000476135	ALDH1A1	P00352	501 aa		9.68	□□□□□ -0.86
HDAC9-223	ENST00000476135	OSBP	P22059	807 aa		9.68	□□□□□ -0.86
HDAC9-223	ENST00000476135	KIF4B	Q2VIQ3	1234 aa		9.68	□□□□□ -0.86
HDAC9-223	ENST00000476135	NLRP3	Q96P20	1036 aa		9.68	□□□□□ -0.86
HDAC9-223	ENST00000476135	CEMIP	Q8WUJ3	1361 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	ABCC4	O15439	1325 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	CENPF	P49454	3210 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	PRSS12	P56730	875 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	SUSD4	Q5VX71	490 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	NYAP1	Q6ZVC0	841 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	FAM198A	Q9UFP1	575 aa		9.67	□□□□□ -0.86
HDAC9-223	ENST00000476135	DDX60	Q8IY21	1712 aa	Known RBP	9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	UBE2Q2L	H0YL09	131 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	NTSR2	O95665	410 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	PRKCSH	P14314	528 aa	Predicted RBP	9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	SLC10A5	Q5PT55	438 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	GAS2L2	Q8NHY3	880 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	ERO1A	Q96HE7	468 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	LRCH3	Q96II8	777 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	PRO3102	Q9H379	93 aa		9.66	□□□□□ -0.86

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