RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 PUS7LQ9H0K6 701 aaKnown RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
UBXN11-214ENST00000475591 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
UBXN11-214ENST00000475591 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.67■□□□□ 0.26
UBXN11-214ENST00000475591 CTDNEP1O95476 244 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 LIG1P18858 919 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 MCAMP43121 646 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 ROBO1Q9Y6N7 1651 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 PFKFB2O60825 505 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
UBXN11-214ENST00000475591 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
UBXN11-214ENST00000475591 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
UBXN11-214ENST00000475591 SPEF2Q9C093 1822 aa16.65■□□□□ 0.26
UBXN11-214ENST00000475591 SLIT2O94813 1529 aa16.65■□□□□ 0.26
UBXN11-214ENST00000475591 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
UBXN11-214ENST00000475591 MPNDQ8N594 471 aa16.65■□□□□ 0.26
UBXN11-214ENST00000475591 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
UBXN11-214ENST00000475591 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
UBXN11-214ENST00000475591 RESTQ13127 1097 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 SPATA32Q96LK8 384 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 H3BQV1 296 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 FGAP02671 866 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 CAMK4Q16566 473 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 IFFO2Q5TF58 517 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 LEO1Q8WVC0 666 aaPredicted RBP16.64■□□□□ 0.25
UBXN11-214ENST00000475591 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
UBXN11-214ENST00000475591 SNAP23O00161 211 aa16.63■□□□□ 0.25
UBXN11-214ENST00000475591 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
UBXN11-214ENST00000475591 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
UBXN11-214ENST00000475591 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
UBXN11-214ENST00000475591 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
UBXN11-214ENST00000475591 NUP98P52948 1817 aa16.63■□□□□ 0.25
UBXN11-214ENST00000475591 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PHKA1P46020 1223 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 APPBP2Q92624 585 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 ELP1O95163 1332 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 GPAA1O43292 621 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PDE8AO60658 829 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PIH1D3Q9NQM4 214 aaKnown RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 NOL7Q9UMY1 257 aaKnown RBP16.62■□□□□ 0.25
UBXN11-214ENST00000475591 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
UBXN11-214ENST00000475591 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 HS1BP3Q53T59 392 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 TICAM2Q86XR7 235 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 ZNF34Q8IZ26 560 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 PDE8BO95263 885 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-214ENST00000475591 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-214ENST00000475591 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
UBXN11-214ENST00000475591 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
UBXN11-214ENST00000475591 INTS5Q6P9B9 1019 aaKnown RBP16.6■□□□□ 0.25
UBXN11-214ENST00000475591 AKAP11Q9UKA4 1901 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
UBXN11-214ENST00000475591 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
UBXN11-214ENST00000475591 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 CKAP2LQ8IYA6 745 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
UBXN11-214ENST00000475591 MYH3P11055 1940 aa16.6■□□□□ 0.25
UBXN11-214ENST00000475591 DDB1Q16531 1140 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 GOLGA6L4A6NEF3 574 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 AP5Z1O43299 807 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 NR1I2O75469 434 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 ADD2P35612 726 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 ATP6V1AP38606 617 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
UBXN11-214ENST00000475591 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
UBXN11-214ENST00000475591 ANTXR2P58335 489 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
UBXN11-214ENST00000475591 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms