RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
SSPO-205ENST00000475488 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
SSPO-205ENST00000475488 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
SSPO-205ENST00000475488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.12■□□□□ 0.17
SSPO-205ENST00000475488 PPANQ9NQ55 473 aaKnown RBP16.12■□□□□ 0.17
SSPO-205ENST00000475488 ALDH3A1P30838 453 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 KRT9P35527 623 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
SSPO-205ENST00000475488 GIPC1O14908 333 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 CCDC25Q86WR0 208 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 FRMD4BQ9Y2L6 1034 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 SMIM23A6NLE4 172 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 TTC14Q96N46 770 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 UAP1Q16222 522 aaPredicted RBP16.11■□□□□ 0.17
SSPO-205ENST00000475488 WDR44Q5JSH3 913 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 KIF14Q15058 1648 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 CFTRP13569 1480 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 HS2ST1Q7LGA3 356 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 FNBP1Q96RU3 617 aa16.11■□□□□ 0.17
SSPO-205ENST00000475488 PSMA7O14818 248 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 PLCG2P16885 1265 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 GNG11P61952 73 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 CCDC89Q8N998 374 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 RAB3GAP1Q15042 981 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 KLF18A0A0U1RQI7 1052 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
SSPO-205ENST00000475488 STX10O60499 249 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
SSPO-205ENST00000475488 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
SSPO-205ENST00000475488 KRT2P35908 639 aa16.1■□□□□ 0.17
SSPO-205ENST00000475488 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 M0QZ92 97 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 KIFAP3Q92845 792 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 EYA3Q99504 573 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 IVNS1ABPQ9Y6Y0 642 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 NME9Q86XW9 330 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 GABPB2Q8TAK5 448 aaPredicted RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
SSPO-205ENST00000475488 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
SSPO-205ENST00000475488 GTF2F1P35269 517 aaKnown RBP eCLIP16.08■□□□□ 0.17
SSPO-205ENST00000475488 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 RTL9Q8NET4 1388 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 PIK3R4Q99570 1358 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 TACC1O75410 805 aa16.08■□□□□ 0.17
SSPO-205ENST00000475488 HSP90AA4PQ58FG1 418 aa16.08■□□□□ 0.16
SSPO-205ENST00000475488 RBM17Q96I25 401 aaKnown RBP16.08■□□□□ 0.16
SSPO-205ENST00000475488 PRDM10Q9NQV6 1147 aa16.08■□□□□ 0.16
SSPO-205ENST00000475488 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
SSPO-205ENST00000475488 ESPNB1AK53 854 aa16.08■□□□□ 0.16
SSPO-205ENST00000475488 FLIIQ13045 1269 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 FAM204AQ9H8W3 233 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 AFG3L2Q9Y4W6 797 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 CTAGE9A4FU28 777 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 INF2Q27J81 1249 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 ZSCAN30Q86W11 494 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 ADCY5O95622 1261 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 ZFYP08048 801 aaPredicted RBP16.07■□□□□ 0.16
SSPO-205ENST00000475488 MCM7P33993 719 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 STRN3Q13033 797 aa16.07■□□□□ 0.16
SSPO-205ENST00000475488 TRPC3Q13507 836 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 GINS2Q9Y248 185 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 CALML3P27482 149 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 SARNPP82979 210 aaKnown RBP16.06■□□□□ 0.16
SSPO-205ENST00000475488 BIRC3Q13489 604 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 TTC21BQ7Z4L5 1316 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 ITIH3Q06033 890 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 AFAP1L2Q8N4X5 818 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 CCDC110Q8TBZ0 833 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 DDB1Q16531 1140 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 OPA1O60313 960 aa16.06■□□□□ 0.16
SSPO-205ENST00000475488 LDHBP07195 334 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms