RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 MYCNP04198 464 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-212ENST00000475411 TRIM27P14373 513 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 IRX3P78415 501 aaPredicted RBP6.57□□□□□ -1.36
CBWD1-212ENST00000475411 CCDC24Q8N4L8 307 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 KAT14Q9H8E8 782 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 CNNM2Q9H8M5 875 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 TSPY3P0CV98 308 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 TSPY8P0CW00 308 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 GNAQP50148 359 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 TPRNQ4KMQ1 711 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 CATIPQ7Z7H3 387 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 RHPN1Q8TCX5 695 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 DNAI2Q9GZS0 605 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 PHAXQ9H814 394 aaKnown RBP6.57□□□□□ -1.36
CBWD1-212ENST00000475411 FAM13BQ9NYF5 915 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 CYP46A1Q9Y6A2 500 aa6.57□□□□□ -1.36
CBWD1-212ENST00000475411 PDCP20941 246 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 TTLL7Q6ZT98 887 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 HELBQ8NG08 1087 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 SMCR8Q8TEV9 937 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 KRT23Q9C075 422 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 COA1Q9GZY4 146 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 IQSEC3Q9UPP2 1182 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 SMC3Q9UQE7 1217 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 ADGRB1O14514 1584 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 NEURL1BA8MQ27 555 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 C21orf2O43822 256 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 CYP19A1P11511 503 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 GTF2IP78347 998 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 TTLL5Q6EMB2 1281 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 BLOC1S2Q6QNY1 142 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 PNMA8AQ86V59 439 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 ZNF804BA4D1E1 1349 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 NKX1-1Q15270 411 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 APOBEC3FQ8IUX4 373 aaKnown RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 BBXQ8WY36 941 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 SNRKQ9NRH2 765 aa6.56□□□□□ -1.36
CBWD1-212ENST00000475411 RBM27Q9P2N5 1060 aaKnown RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.56□□□□□ -1.36
CBWD1-212ENST00000475411 KCNQ4P56696 695 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 NOM1Q5C9Z4 860 aaKnown RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 MFSD6Q6ZSS7 791 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 STK11IPQ8N1F8 1099 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 ESR2Q92731 530 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 BICC1Q9H694 974 aaKnown RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 SLC4A4Q9Y6R1 1079 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 ECE1P42892 770 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 TMED8Q6PL24 325 aaPredicted RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 HACL1Q9UJ83 578 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 TTC41PQ6P2S7 1318 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 USP17L3A6NCW0 530 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 USP17L4A6NCW7 530 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 RGL2O15211 777 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 TRIM21P19474 475 aaKnown RBP6.55□□□□□ -1.36
CBWD1-212ENST00000475411 CCNA1P78396 465 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 USP17L1Q7RTZ2 530 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 IL27Q8NEV9 243 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 VTI1AQ96AJ9 217 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 CRAMP1Q96RY5 1269 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 SPC25Q9HBM1 224 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 NLRP10Q86W26 655 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 SYNE4Q8N205 404 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 TMTC2Q8N394 836 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 SCLT1Q96NL6 688 aa6.55□□□□□ -1.36
CBWD1-212ENST00000475411 NWD1Q149M9 1564 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 LMNB1P20700 586 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 MMP14P50281 582 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 ANKRD44Q8N8A2 993 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 MCM9Q9NXL9 1143 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 NFIXQ14938 502 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 SLC9C2Q5TAH2 1124 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 TNPO1Q92973 898 aaKnown RBP6.54□□□□□ -1.36
CBWD1-212ENST00000475411 MEIS3Q99687 375 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 ROBO1Q9Y6N7 1651 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 TPD52L1Q16890 204 aaPredicted RBP6.54□□□□□ -1.36
CBWD1-212ENST00000475411 PODNQ7Z5L7 613 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 PAG1Q9NWQ8 432 aa6.54□□□□□ -1.36
CBWD1-212ENST00000475411 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 OSBPP22059 807 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 YY1P25490 414 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 PLS1Q14651 629 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 CWC27Q6UX04 472 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 SP8Q8IXZ3 490 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 JMYQ8N9B5 988 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 ANKRD20A12PQ8NF67 263 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 PNMA3Q9UL41 463 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 KCNQ3O43525 872 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 IARSP41252 1262 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 DOK7Q18PE1 504 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 ZSCAN31Q96LW9 406 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms