RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 SNRKQ9NRH2 765 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 CLIC4Q9Y696 253 aa16.01■□□□□ 0.15
SEMA4D-217ENST00000475255 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
SEMA4D-217ENST00000475255 PDE4CQ08493 712 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 PDIA6Q15084 440 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 HSP90AB3PQ58FF7 597 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 ERO1AQ96HE7 468 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 ATP1A3P13637 1013 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 TIMM10P62072 90 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 GCKRQ14397 625 aa16■□□□□ 0.15
SEMA4D-217ENST00000475255 ZRSR1Q15695 479 aaKnown RBP16■□□□□ 0.15
SEMA4D-217ENST00000475255 PFKFB2O60825 505 aa15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 DDX58O95786 925 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 POLR3GO15318 223 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 DHX32Q7L7V1 743 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-217ENST00000475255 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 ARHGAP29Q52LW3 1261 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 ALDH8A1Q9H2A2 487 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 DDX21Q9NR30 783 aaKnown RBP eCLIP15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 DNAI1Q9UI46 699 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 AGLP35573 1532 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 CTAGE5O15320 804 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 ATP5JP18859 108 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 MARCKSP29966 332 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 STK38Q15208 465 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 MRPS27Q92552 414 aaKnown RBP15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 NEMFO60524 1076 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 CLCN6P51797 869 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 PSME1Q06323 249 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
SEMA4D-217ENST00000475255 SEC31AO94979 1220 aaKnown RBP15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 FDPSP14324 419 aaKnown RBP15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 ESCO1Q5FWF5 840 aa15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 ZNF396Q96N95 335 aaPredicted RBP15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 CAVIN2O95810 425 aa15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 PDIA3P30101 505 aaKnown RBP15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 DPF2Q92785 391 aa15.97■□□□□ 0.15
SEMA4D-217ENST00000475255 NAA16Q6N069 864 aaPredicted RBP15.96■□□□□ 0.15
SEMA4D-217ENST00000475255 E7EWF7 191 aa15.96■□□□□ 0.15
SEMA4D-217ENST00000475255 HDAC5Q9UQL6 1122 aa15.96■□□□□ 0.15
SEMA4D-217ENST00000475255 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.14
SEMA4D-217ENST00000475255 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 FANCGO15287 622 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 CHD2O14647 1828 aaKnown RBP15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 A0A087WZG4 1122 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 LMBR1LQ6UX01 489 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 ZNF594Q96JF6 807 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 AIFM3Q96NN9 605 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
SEMA4D-217ENST00000475255 SLC3A2P08195 630 aaKnown RBP15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 RXRAP19793 462 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 ZCCHC17Q9NP64 241 aaKnown RBP15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 CARMIL3Q8ND23 1372 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 JCADQ9P266 1359 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 ANKRD24Q8TF21 1146 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 HAUS7Q99871 368 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 NOL10Q9BSC4 688 aaKnown RBP15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 TMEM51Q9NW97 253 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 FHOD1Q9Y613 1164 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 UTYO14607 1347 aa15.94■□□□□ 0.14
SEMA4D-217ENST00000475255 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 KBTBD3Q8NAB2 608 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 LINC00301Q8NCQ3 95 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 TMEM232C9JQI7 657 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 GSDMDP57764 484 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 ANKRD13DQ6ZTN6 518 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 ZFP91Q96JP5 570 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 UTP14AQ9BVJ6 771 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 CARD6Q9BX69 1037 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 OSBPL5Q9H0X9 879 aaPredicted RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 TBX22Q9Y458 520 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 ZNF202O95125 648 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 EXOSC10Q01780 885 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms