RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.05
SRRM1-210ENST00000474843 RGS9O75916 674 aaPredicted RBP8.51□□□□□ -1.05
SRRM1-210ENST00000474843 NEFLP07196 543 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 P4HBP07237 508 aaKnown RBP8.51□□□□□ -1.05
SRRM1-210ENST00000474843 DGKGP49619 791 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 MFAP1P55081 439 aaKnown RBP8.51□□□□□ -1.05
SRRM1-210ENST00000474843 FMR1Q06787 632 aaKnown RBP eCLIP8.51□□□□□ -1.05
SRRM1-210ENST00000474843 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 MICALL1Q8N3F8 863 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 HHIPQ96QV1 700 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 CSRNP1Q96S65 589 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 NPHS2Q9NP85 383 aa8.51□□□□□ -1.05
SRRM1-210ENST00000474843 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
SRRM1-210ENST00000474843 TOPBP1Q92547 1522 aa8.5□□□□□ -1.05
SRRM1-210ENST00000474843 IRS1P35568 1242 aa8.5□□□□□ -1.05
SRRM1-210ENST00000474843 WRNQ14191 1432 aaPredicted RBP eCLIP8.5□□□□□ -1.05
SRRM1-210ENST00000474843 PMEPA1Q969W9 287 aa8.5□□□□□ -1.05
SRRM1-210ENST00000474843 LILRB5O75023 590 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 EDN3P14138 238 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 CEP135Q66GS9 1140 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 GDF6Q6KF10 455 aaPredicted RBP8.49□□□□□ -1.05
SRRM1-210ENST00000474843 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 CEP120Q8N960 986 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 ZKSCAN3Q9BRR0 538 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 TRIM33Q9UPN9 1127 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
SRRM1-210ENST00000474843 GSK3AP49840 483 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-210ENST00000474843 PI16Q6UXB8 463 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 GALNT12Q8IXK2 581 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 CCDC74AQ96AQ1 378 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-210ENST00000474843 OSMRQ99650 979 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 WWC3Q9ULE0 1092 aa8.48□□□□□ -1.05
SRRM1-210ENST00000474843 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 AFF1P51825 1210 aaKnown RBP8.47□□□□□ -1.05
SRRM1-210ENST00000474843 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
SRRM1-210ENST00000474843 ADAMTSL4Q6UY14 1074 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 DZANK1Q9NVP4 752 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
SRRM1-210ENST00000474843 CUX1P39880 1505 aa8.46□□□□□ -1.05
SRRM1-210ENST00000474843 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
SRRM1-210ENST00000474843 GRIK5Q16478 980 aa8.46□□□□□ -1.06
SRRM1-210ENST00000474843 EPS8L3Q8TE67 593 aaKnown RBP8.46□□□□□ -1.06
SRRM1-210ENST00000474843 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
SRRM1-210ENST00000474843 SOGA1O94964 1423 aa8.46□□□□□ -1.06
SRRM1-210ENST00000474843 A0A1W2PP55 124 aa8.45□□□□□ -1.06
SRRM1-210ENST00000474843 NID1P14543 1247 aa8.45□□□□□ -1.06
SRRM1-210ENST00000474843 SUZ12Q15022 739 aaKnown RBP8.45□□□□□ -1.06
SRRM1-210ENST00000474843 LINC00114Q6XXX2 140 aa8.45□□□□□ -1.06
SRRM1-210ENST00000474843 TRIM11Q96F44 468 aa8.45□□□□□ -1.06
SRRM1-210ENST00000474843 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 NFKBIEO00221 500 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 GADD45BO75293 160 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-210ENST00000474843 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
SRRM1-210ENST00000474843 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-210ENST00000474843 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-210ENST00000474843 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
SRRM1-210ENST00000474843 EHD4Q9H223 541 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 SUV39H2Q9H5I1 410 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
SRRM1-210ENST00000474843 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 PDE2AO00408 941 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-210ENST00000474843 GNB5O14775 395 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 CDC25BP30305 580 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 TXNDC11Q6PKC3 985 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 FGD5Q6ZNL6 1462 aa8.43□□□□□ -1.06
SRRM1-210ENST00000474843 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 IGHA1P01876 353 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 DMRTC2Q8IXT2 367 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 IL22RA1Q8N6P7 574 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 BEND7Q8N7W2 519 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 TTC9Q92623 222 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 PLVAPQ9BX97 442 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 SH2B1Q9NRF2 756 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 RNF19AQ9NV58 838 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 NLRP2Q9NX02 1062 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 POLA1P09884 1462 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-210ENST00000474843 SYNJ1O43426 1573 aa8.42□□□□□ -1.06
SRRM1-210ENST00000474843 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
SRRM1-210ENST00000474843 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
SRRM1-210ENST00000474843 TMEM102Q8N9M5 508 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-210ENST00000474843 NXPE3Q969Y0 559 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms