RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 TSC1Q92574 1164 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 DDX19AQ9NUU7 478 aaKnown RBP17.03■□□□□ 0.32
NELFCD-204ENST00000474543 JAK2O60674 1132 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
NELFCD-204ENST00000474543 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
NELFCD-204ENST00000474543 TFCP2Q12800 502 aa17.02■□□□□ 0.32
NELFCD-204ENST00000474543 ANO6Q4KMQ2 910 aa17.02■□□□□ 0.32
NELFCD-204ENST00000474543 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
NELFCD-204ENST00000474543 CLSTN2Q9H4D0 955 aa17.02■□□□□ 0.32
NELFCD-204ENST00000474543 CBX8Q9HC52 389 aa17.02■□□□□ 0.32
NELFCD-204ENST00000474543 ZNF710Q8N1W2 664 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 ZNF609O15014 1411 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 CHGBP05060 677 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 RESTQ13127 1097 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 Q6ZUG5 572 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 LRP10Q7Z4F1 713 aa17.01■□□□□ 0.31
NELFCD-204ENST00000474543 AFDNP55196 1824 aaKnown RBP17.01■□□□□ 0.31
NELFCD-204ENST00000474543 NR1I2O75469 434 aa17■□□□□ 0.31
NELFCD-204ENST00000474543 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
NELFCD-204ENST00000474543 BRF1Q92994 677 aa17■□□□□ 0.31
NELFCD-204ENST00000474543 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
NELFCD-204ENST00000474543 RFX7Q2KHR2 1363 aa17■□□□□ 0.31
NELFCD-204ENST00000474543 CYP21A2P08686 494 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 PTGS1P23219 599 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 TXNRD1Q16881 649 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
NELFCD-204ENST00000474543 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
NELFCD-204ENST00000474543 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
NELFCD-204ENST00000474543 ARID3AQ99856 593 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
NELFCD-204ENST00000474543 DBNDD2Q9BQY9 259 aa16.99■□□□□ 0.31
NELFCD-204ENST00000474543 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 TDRD7Q8NHU6 1098 aaKnown RBP16.98■□□□□ 0.31
NELFCD-204ENST00000474543 BICD2Q8TD16 824 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
NELFCD-204ENST00000474543 HAUS7Q99871 368 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
NELFCD-204ENST00000474543 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
NELFCD-204ENST00000474543 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
NELFCD-204ENST00000474543 PLA2G4DQ86XP0 818 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 PROM2Q8N271 834 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
NELFCD-204ENST00000474543 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
NELFCD-204ENST00000474543 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 H3BQV1 296 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 ZNF75DP51815 510 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 CCDC186Q7Z3E2 898 aa16.97■□□□□ 0.31
NELFCD-204ENST00000474543 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
NELFCD-204ENST00000474543 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 FAM177BA6PVY3 158 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 SCRN1Q12765 414 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 SMARCC2Q8TAQ2 1214 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.31
NELFCD-204ENST00000474543 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.3
NELFCD-204ENST00000474543 ZNF165P49910 485 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 KCNQ4P56696 695 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 STOX1Q6ZVD7 989 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.3
NELFCD-204ENST00000474543 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 TRIM5Q9C035 493 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 DNAJC25Q9H1X3 360 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.3
NELFCD-204ENST00000474543 CFAP45Q9UL16 551 aa16.96■□□□□ 0.3
NELFCD-204ENST00000474543 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
NELFCD-204ENST00000474543 PFKFB2O60825 505 aa16.95■□□□□ 0.3
NELFCD-204ENST00000474543 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
NELFCD-204ENST00000474543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.95■□□□□ 0.3
NELFCD-204ENST00000474543 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
NELFCD-204ENST00000474543 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
NELFCD-204ENST00000474543 LY75O60449 1722 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 A0A087WZG4 1122 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
NELFCD-204ENST00000474543 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
NELFCD-204ENST00000474543 CASP7P55210 303 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 CHAF1AQ13111 956 aaPredicted RBP16.94■□□□□ 0.3
NELFCD-204ENST00000474543 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 LLPHQ9BRT6 129 aaKnown RBP16.94■□□□□ 0.3
NELFCD-204ENST00000474543 LRMPQ12912 555 aa16.94■□□□□ 0.3
NELFCD-204ENST00000474543 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
NELFCD-204ENST00000474543 RREB1Q92766 1687 aa16.93■□□□□ 0.3
NELFCD-204ENST00000474543 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
NELFCD-204ENST00000474543 SIK1P57059 783 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms