RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 ZSCAN1Q8NBB4 408 aa10.14□□□□□ -0.79
VPS50-211ENST00000474412 C1orf216Q8TAB5 229 aa10.14□□□□□ -0.79
VPS50-211ENST00000474412 ATP7BP35670 1465 aa10.14□□□□□ -0.79
VPS50-211ENST00000474412 AKAP12Q02952 1782 aa10.14□□□□□ -0.79
VPS50-211ENST00000474412 ATP4AP20648 1035 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
VPS50-211ENST00000474412 TEAD4Q15561 434 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
VPS50-211ENST00000474412 DCAF11Q8TEB1 546 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 ZDHHC1Q8WTX9 485 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 HINFPQ9BQA5 517 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 CRISPLD1Q9H336 500 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 ZDHHC3Q9NYG2 299 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 SERPINA10Q9UK55 444 aa10.13□□□□□ -0.79
VPS50-211ENST00000474412 SERTM1A2A2V5 107 aa10.12□□□□□ -0.79
VPS50-211ENST00000474412 NOS2P35228 1153 aa10.12□□□□□ -0.79
VPS50-211ENST00000474412 GAS6Q14393 721 aa10.12□□□□□ -0.79
VPS50-211ENST00000474412 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
VPS50-211ENST00000474412 PRAM1Q96QH2 718 aa10.12□□□□□ -0.79
VPS50-211ENST00000474412 GLI3P10071 1580 aa10.11□□□□□ -0.79
VPS50-211ENST00000474412 RGS12O14924 1447 aa10.11□□□□□ -0.79
VPS50-211ENST00000474412 THBS1P07996 1170 aa10.11□□□□□ -0.79
VPS50-211ENST00000474412 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
VPS50-211ENST00000474412 PRR36Q9H6K5 1346 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 NRKQ7Z2Y5 1582 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 ANKARQ7Z5J8 1434 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
VPS50-211ENST00000474412 TXLNAP40222 546 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 MEX3CQ5U5Q3 659 aaKnown RBP10.1□□□□□ -0.79
VPS50-211ENST00000474412 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
VPS50-211ENST00000474412 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 GJA3Q9Y6H8 435 aa10.1□□□□□ -0.79
VPS50-211ENST00000474412 AFF2P51816 1311 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.09□□□□□ -0.79
VPS50-211ENST00000474412 LGR5O75473 907 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 FAM200AQ8TCP9 573 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
VPS50-211ENST00000474412 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 MON2Q7Z3U7 1717 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 WNK3Q9BYP7 1800 aa10.09□□□□□ -0.79
VPS50-211ENST00000474412 NPHP3Q7Z494 1330 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 A0A1W2PNR3 127 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 FOXO3O43524 673 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 MX2P20592 715 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
VPS50-211ENST00000474412 C8orf37Q96NL8 207 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 SIN3AQ96ST3 1273 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 NOVA2Q9UNW9 492 aaKnown RBP10.08□□□□□ -0.8
VPS50-211ENST00000474412 PIK3C2AO00443 1686 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 COL14A1Q05707 1796 aaKnown RBP10.08□□□□□ -0.8
VPS50-211ENST00000474412 RGPD5Q99666 1765 aa10.08□□□□□ -0.8
VPS50-211ENST00000474412 ATAD2Q6PL18 1390 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 EML1O00423 815 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 SRSF11Q05519 484 aaKnown RBP10.07□□□□□ -0.8
VPS50-211ENST00000474412 NLRP8Q86W28 1048 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 ARXQ96QS3 562 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 CFHR5Q9BXR6 569 aa10.07□□□□□ -0.8
VPS50-211ENST00000474412 NSFL1CQ9UNZ2 370 aaKnown RBP10.07□□□□□ -0.8
VPS50-211ENST00000474412 CDK12Q9NYV4 1490 aaPredicted RBP10.06□□□□□ -0.8
VPS50-211ENST00000474412 LORP23490 312 aaPredicted RBP10.06□□□□□ -0.8
VPS50-211ENST00000474412 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
VPS50-211ENST00000474412 ZCCHC2Q9C0B9 1178 aaKnown RBP10.06□□□□□ -0.8
VPS50-211ENST00000474412 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
VPS50-211ENST00000474412 C21orf2O43822 256 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 UBAP2LQ14157 1087 aaKnown RBP10.05□□□□□ -0.8
VPS50-211ENST00000474412 GAS2L2Q8NHY3 880 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 PMFBP1Q8TBY8 1022 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 PBXIP1Q96AQ6 731 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 NEUROD4Q9HD90 331 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 POGKQ9P215 609 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
VPS50-211ENST00000474412 SLIT2O94813 1529 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 ATRNO75882 1429 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 SPATA31A3Q5VYP0 1347 aa10.05□□□□□ -0.8
VPS50-211ENST00000474412 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 LMO7Q8WWI1 1683 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
VPS50-211ENST00000474412 BNIP3LO60238 219 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
VPS50-211ENST00000474412 SVOPQ8N4V2 548 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 PHACTR1Q9C0D0 580 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 PCDHGC4Q9Y5F7 938 aa10.04□□□□□ -0.8
VPS50-211ENST00000474412 SLURP2P0DP57 97 aa10.03□□□□□ -0.8
VPS50-211ENST00000474412 LTN1O94822 1766 aa10.03□□□□□ -0.8
VPS50-211ENST00000474412 DCDC2BA2VCK2 349 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 FGFR3P22607 806 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 IGFBP4P22692 258 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 ZNF772Q68DY9 489 aaPredicted RBP10.02□□□□□ -0.81
VPS50-211ENST00000474412 LRRC69Q6ZNQ3 347 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms