RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 LRRC2Q9BYS8 371 aa21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 KIAA1468Q9P260 1216 aa21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 A0A1B0GVL5 298 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 REXO1L1PQ8IX06 675 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 COL15A1P39059 1388 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 C10orf67Q8IYJ2 551 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 USHBP1Q8N6Y0 703 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 LLPHQ9BRT6 129 aaKnown RBP21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 PCDHA7Q9UN72 937 aa21.61■■□□□ 1.05
ECHDC1-214ENST00000474289 ALDH1L1O75891 902 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 NCAPHQ15003 741 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 ZRSR1Q15695 479 aaKnown RBP21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 ATL3Q6DD88 541 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 ILDR1Q86SU0 546 aaPredicted RBP21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 NEDD4P46934 1319 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 CTDNEP1O95476 244 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 HOXC9P31274 260 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 NDUFA8P51970 172 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 CERS3Q8IU89 383 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 EFCC1Q9HA90 598 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 C9orf78Q9NZ63 289 aaPredicted RBP21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 NWD1Q149M9 1564 aa21.6■■□□□ 1.05
ECHDC1-214ENST00000474289 PTPDC1A2A3K4 754 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 LTKP29376 864 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 GYS2P54840 703 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 SIL1Q9H173 461 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 ABCC6O95255 1503 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 PFKFB2O60825 505 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 NLRP6P59044 892 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 PSME1Q06323 249 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
ECHDC1-214ENST00000474289 PTPRUQ92729 1446 aa21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 BIN1O00499 593 aa21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 GPR161Q8N6U8 529 aaKnown RBP21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 EDC3Q96F86 508 aaKnown RBP21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 ATG3Q9NT62 314 aa21.58■■□□□ 1.05
ECHDC1-214ENST00000474289 LMOD1P29536 600 aaPredicted RBP21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 FANCCQ00597 558 aa21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 GUCY1B3Q02153 619 aa21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 ADALQ6DHV7 355 aa21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 GOLGA5Q8TBA6 731 aa21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 UTP14AQ9BVJ6 771 aaKnown RBP21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 ARFGAP3Q9NP61 516 aa21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 CWC15Q9P013 229 aaKnown RBP21.58■■□□□ 1.04
ECHDC1-214ENST00000474289 TNRQ92752 1358 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 IRX3P78415 501 aaPredicted RBP21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 FBXO18Q8NFZ0 1043 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 SEC62Q99442 399 aaKnown RBP21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 FUT8Q9BYC5 575 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 ADAM21Q9UKJ8 722 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 PPFIA3O75145 1194 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 CYP21A2P08686 494 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 ATP1A3P13637 1013 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 EIF4A1P60842 406 aaKnown RBP21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 EXOC4Q96A65 974 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 AK7Q96M32 723 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
ECHDC1-214ENST00000474289 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 NOP2P46087 812 aaKnown RBP21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 SRLQ86TD4 932 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 VWA3AA6NCI4 1184 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 KCNQ3O43525 872 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 LMAN1P49257 510 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.041e-11■■■□□ 15.6
ECHDC1-214ENST00000474289 FAM177A1Q8N128 213 aaPredicted RBP21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 HSD3B7Q9H2F3 369 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 PSD3Q9NYI0 1048 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
ECHDC1-214ENST00000474289 A0A1W2PQ27 194 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 A0A1W2PQ64 194 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 A0A1W2PQD8 194 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 CASQ1P31415 396 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 GNL2Q13823 731 aaKnown RBP21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 DIP2BQ9P265 1576 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 NLRP12P59046 1061 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 RSRC2Q7L4I2 434 aaKnown RBP21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 MPHOSPH8Q99549 860 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 PARD6BQ9BYG5 372 aa21.55■■□□□ 1.04
ECHDC1-214ENST00000474289 H3BQF6 201 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 MAP3K9P80192 1104 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 CWF19L2Q2TBE0 894 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 CCDC129Q6ZRS4 1044 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 SALL1Q9NSC2 1324 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 SLC3A2P08195 630 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 CCT2P78371 535 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 PPP2R3AQ06190 1150 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 GOLGA8FQ08AF8 430 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 GOLGA8DPQ0D2H9 430 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 APOBRQ0VD83 1088 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 DPF2Q92785 391 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 ZFP91Q96JP5 570 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 WDR24Q96S15 920 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 RTEL1Q9NZ71 1219 aa21.54■■□□□ 1.04
ECHDC1-214ENST00000474289 RRP15Q9Y3B9 282 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms