RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PLIN1O60240 522 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 RBM10P98175 930 aaKnown RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 DHX8Q14562 1220 aaKnown RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 CCSAPQ6IQ19 270 aaPredicted RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 MCF2L2Q86YR7 1114 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 CACTIN-AS1Q8N1I8 211 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 XAGE2Q96GT9 111 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 GDF2Q9UK05 429 aaPredicted RBP7.62□□□□□ -1.19
RTF1-203ENST00000473214 PHF24Q9UPV7 400 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 ABCA5Q8WWZ7 1642 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 GRIN2AQ12879 1464 aa7.62□□□□□ -1.19
RTF1-203ENST00000473214 EPB41L2O43491 1005 aaKnown RBP7.61□□□□□ -1.19
RTF1-203ENST00000473214 SORBS3O60504 671 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 LDHAP00338 332 aaKnown RBP7.61□□□□□ -1.19
RTF1-203ENST00000473214 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
RTF1-203ENST00000473214 PHKA2P46019 1235 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 GRIN2CQ14957 1233 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 LINC00114Q6XXX2 140 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 VPS37DQ86XT2 251 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 PLEKHM2Q8IWE5 1019 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
RTF1-203ENST00000473214 MPHOSPH6Q99547 160 aaKnown RBP7.61□□□□□ -1.19
RTF1-203ENST00000473214 IER2Q9BTL4 223 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 SUV39H2Q9H5I1 410 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 KCNG1Q9UIX4 513 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 NUP160Q12769 1436 aa7.61□□□□□ -1.19
RTF1-203ENST00000473214 C1QTNF9BB2RNN3 333 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 PRMT3O60678 531 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 CD53P19397 219 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 ZRSR2Q15696 482 aaKnown RBP7.6□□□□□ -1.19
RTF1-203ENST00000473214 PCGF5Q86SE9 256 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 WDR75Q8IWA0 830 aaKnown RBP7.6□□□□□ -1.19
RTF1-203ENST00000473214 CXorf38Q8TB03 319 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 PCGF6Q9BYE7 350 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 MAP3K20Q9NYL2 800 aaKnown RBP7.6□□□□□ -1.19
RTF1-203ENST00000473214 ADCY10Q96PN6 1610 aa7.6□□□□□ -1.19
RTF1-203ENST00000473214 ADAMTS12P58397 1594 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 CFAP69A5D8W1 941 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 PSMD2Q13200 908 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 SDR16C5Q8N3Y7 309 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 GOLGA6L1Q8N7Z2 621 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 PDILTQ8N807 584 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 FBXO41Q8TF61 875 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
RTF1-203ENST00000473214 DUSP9Q99956 384 aaKnown RBP7.59□□□□□ -1.19
RTF1-203ENST00000473214 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.59□□□□□ -1.193e-11■■□□□ 11.6
RTF1-203ENST00000473214 NDFIP2Q9NV92 336 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
RTF1-203ENST00000473214 EID1Q9Y6B2 187 aa7.59□□□□□ -1.19
RTF1-203ENST00000473214 MAPKBP1O60336 1514 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 PPRC1Q5VV67 1664 aaKnown RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 C2CD2LO14523 706 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 LDHBP07195 334 aaKnown RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 VIL1P09327 827 aaKnown RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 ITGB7P26010 798 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 MSX1P28360 303 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 COPB2P35606 906 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 USP5P45974 858 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 ECM1Q16610 540 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 PLEKHG4Q58EX7 1191 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 ILDR2Q71H61 639 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 TMC4Q7Z404 712 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 CD163Q86VB7 1156 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 RNF135Q8IUD6 432 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 CKAP2LQ8IYA6 745 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
RTF1-203ENST00000473214 PAGR1Q9BTK6 254 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 RUBCNLQ9H714 662 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 CEP126Q9P2H0 1117 aa7.58□□□□□ -1.2
RTF1-203ENST00000473214 COL17A1Q9UMD9 1497 aaPredicted RBP7.57□□□□□ -1.2
RTF1-203ENST00000473214 GNALP38405 381 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 POU5F1BQ06416 359 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 DPYDQ12882 1025 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
RTF1-203ENST00000473214 SLCO4C1Q6ZQN7 724 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 TMC7Q7Z402 723 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 ZNF654Q8IZM8 581 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 PGBD3Q8N328 593 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 RELTQ969Z4 430 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 INO80BQ9C086 356 aaPredicted RBP7.57□□□□□ -1.2
RTF1-203ENST00000473214 NRBP1Q9UHY1 535 aa7.57□□□□□ -1.2
RTF1-203ENST00000473214 THRAP3Q9Y2W1 955 aaKnown RBP7.57□□□□□ -1.2
RTF1-203ENST00000473214 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms