RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CNTNAP3BQ96NU0 1288 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 CNTNAP3Q9BZ76 1288 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 MYH16Q9H6N6 1097 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 ZFYVE28Q9HCC9 887 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 ABCB6Q9NP58 842 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 SIAH2O43255 324 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 ASMTLO95671 621 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 GNRH1P01148 92 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 ATP4AP20648 1035 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 SOX9P48436 509 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 APOBRQ0VD83 1088 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 SPRED3Q2MJR0 410 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 BRDTQ58F21 947 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 RC3H1Q5TC82 1133 aaKnown RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 C6orf15Q6UXA7 325 aaPredicted RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 C14orf80Q86SX3 495 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 TMEM74Q96NL1 305 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 SMAD5Q99717 465 aaKnown RBP3.66□□□□□ -1.82
XRN1-210ENST00000472697 FAM86C1Q9NVL1 165 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 MSRB2Q9Y3D2 182 aa3.66□□□□□ -1.82
XRN1-210ENST00000472697 PLEKHD1A6NEE1 506 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 GJB6O95452 261 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 INPP5BP32019 993 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 KCNC4Q03721 635 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 FAAP100Q0VG06 881 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 C4orf17Q53FE4 359 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 AXDND1Q5T1B0 1012 aaPredicted RBP3.65□□□□□ -1.82
XRN1-210ENST00000472697 SYCP2LQ5T4T6 812 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 GK5Q6ZS86 529 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 SUSD3Q96L08 255 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 ESF1Q9H501 851 aaKnown RBP3.65□□□□□ -1.82
XRN1-210ENST00000472697 LRRC4BQ9NT99 713 aa3.65□□□□□ -1.82
XRN1-210ENST00000472697 FAM83GA6ND36 823 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 UBAP1LF5GYI3 381 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 CDK2AP1O14519 115 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 PHACTR2O75167 634 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 USP5P45974 858 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 RHBDL3P58872 404 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 PPP2R5EQ16537 467 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 DDR2Q16832 855 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 PCNX4Q63HM2 1172 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 STK35Q8TDR2 534 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 XAGE2Q96GT9 111 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 MRGPRX2Q96LB1 330 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 INSM2Q96T92 566 aaPredicted RBP3.65□□□□□ -1.83
XRN1-210ENST00000472697 MPHOSPH6Q99547 160 aaKnown RBP3.65□□□□□ -1.83
XRN1-210ENST00000472697 PRR14Q9BWN1 585 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 TRIM8Q9BZR9 551 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 BAZ1AQ9NRL2 1556 aaPredicted RBP3.65□□□□□ -1.83
XRN1-210ENST00000472697 PTCH2Q9Y6C5 1203 aa3.65□□□□□ -1.83
XRN1-210ENST00000472697 GREM1O60565 184 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 CLN3Q13286 438 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 CAMK2GQ13555 558 aaPredicted RBP3.64□□□□□ -1.83
XRN1-210ENST00000472697 DDX42Q86XP3 938 aaKnown RBP eCLIP3.64□□□□□ -1.83
XRN1-210ENST00000472697 STAG2Q8N3U4 1231 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 CPLX3Q8WVH0 158 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 JARID2Q92833 1246 aaPredicted RBP3.64□□□□□ -1.83
XRN1-210ENST00000472697 SLC39A13Q96H72 371 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 METTL14Q9HCE5 456 aaKnown RBP3.64□□□□□ -1.83
XRN1-210ENST00000472697 LAMC3Q9Y6N6 1575 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 A0A1W2PP55 124 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 SHTN1A0MZ66 631 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 ADH1CP00326 375 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 L1CAMP32004 1257 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 WNT7BP56706 349 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 CLCQ05315 142 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 TEAD4Q15561 434 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 CDK15Q96Q40 435 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 TMEM260Q9NX78 707 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 ATP8A1Q9Y2Q0 1164 aa3.64□□□□□ -1.83
XRN1-210ENST00000472697 A0A0U1RQG5 324 aaPredicted RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 PPFIA4O75335 1185 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 MCM4P33991 863 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 RAB27AP51159 221 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 HIRAP54198 1017 aaPredicted RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 GRIN3AQ8TCU5 1115 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 SEC16BQ96JE7 1060 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 RPS6KC1Q96S38 1066 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 OXCT2Q9BYC2 517 aaPredicted RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 PRKAG3Q9UGI9 489 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 MAP4K5Q9Y4K4 846 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 A0A087X0B3 334 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 PDPK1O15530 556 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 DNAJA2O60884 412 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 SASH3O75995 380 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 SCGB1D2O95969 90 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 ST13P50502 369 aaKnown RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 MTERF2Q49AM1 385 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 GORABQ5T7V8 394 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 LIAT1Q6ZQX7 453 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 PRICKLE2Q7Z3G6 844 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 CYP2U1Q7Z449 544 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 BTLAQ7Z6A9 289 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 THNSL2Q86YJ6 484 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 PPARGC1BQ86YN6 1023 aaKnown RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 SNX29Q8TEQ0 813 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 CLUHP3Q96NS8 147 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 ZKSCAN3Q9BRR0 538 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 SRRTQ9BXP5 876 aaKnown RBP3.63□□□□□ -1.83
XRN1-210ENST00000472697 BCL11AQ9H165 835 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms